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9D6F

Cryo-em structure of e. coli fimh lectin domain bound to fabs 440-2 and 454-3

PDB DOI: 10.2210/pdb9d6f/pdb

Classification: CELL ADHESION,SUGAR BINDING PROTEIN
Organism(s): Escherichia Coli , Mus Musculus

Deposited: 2024-08-15
Deposition Author(s): Han, S. , Lees, J.A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.24 Å

Literature

Cryo-em structure of e. coli fimh lectin domain bound to fabs 440-2 and 454-3

Han, S. , Lees, J.A.

Primary Citation of Related Structures: 9D6F


Proteins
Molecule Chains Sequence Length Organism Sequence
440-2 Fab light chain L 221 Escherichia Coli , Mus Musculus SPDIVMTQAAFSNPVTLGTSASISCSSSKSLLHSNGITYLYWYLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTDFALRISRVETEDVGVYYCAQMLERPYTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
440-2 Fab heavy chain H 230 Escherichia Coli , Mus Musculus SPQVQLTQSGAELVKPGASVKISCKASGYTFTDYYINWVKQRPGQGLEWIGKIGPGNNSTYYKENFEGKATLTADKSFSTAYMQLSSLTSEDSAVYFCARWGYLWSTGGGFDYWGHGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIGGGHHHHHH
445-3 Fab heavy chain A 225 Escherichia Coli , Mus Musculus SPQVQLQQSGSELAKPGASVKLSCKASGYTFTRYWMHWVKQRPGQGLEWIGYSNPSSGYTNFNQKFKDKAALTADTSSNTAYIQLNGLTFEDSAVYFCARDGDPPFVYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIGGGHHHHHH
445-3 Fab light chain C 216 Escherichia Coli , Mus Musculus SPDIQMTQSPASLSASVGETVTITCRASENIYSNLAWYQQKQGKSPQLLVDGATNLADGVPSRFSGSGSGTQFSLKINSVQSEDFGNYYCQHFYGTPFTFGTGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Type 1 fimbrin D-mannose specific adhesin FimH, Donor strand complemented with FimG peptide 'triple mutant' D 310 Escherichia Coli , Mus Musculus FACKTASGTAIPIGAASANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRQGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQGGSSGGGADVTITVNGKVVAKGGHHHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-15
Deposition Author(s): Han, S. , Lees, J.A.