9D5J
Human adenosine deaminase acting on dsrna (adar2-rd) bound to dsrna containing deoxyinosine at the -1 position of the guide strand
PDB DOI: 10.2210/pdb9d5j/pdb
Classification: RNA BINDING PROTEIN/RNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2024-08-13 Deposition Author(s): Campbell, K. , Cheng, J. , Fisher, A.J. , Manjunath, A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
Human adenosine deaminase acting on dsrna (adar2-rd) bound to dsrna containing deoxyinosine at the -1 position of the guide strand
Campbell, K. , Cheng, J. , Fisher, A.J. , Manjunath, A.
Primary Citation of Related Structures: 9D5J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Isoform 4 of Double-stranded RNA-specific editase 1 | A | 487 | Homo Sapiens , Synthetic Construct | ASLAQPPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALAAIFNLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGQGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLTP |
| Isoform 4 of Double-stranded RNA-specific editase 1 | B | 487 | Homo Sapiens , Synthetic Construct | ASLAQPPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALAAIFNLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGQGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLTP |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA Top Strand Containing 8-azanebularine (8AZ) | c | 32 | NA | GCUCGCGAUGCGXGAGGGCUCUGAUAGCUACG |
| RNA Bottom Strand containing deoxyinosine complementary to a guanosine adjacent to the target site | d | 32 | NA | CGUAGCUAUCAGAGCCCCCCIGCAUCGCGAGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-08-13 Deposition Author(s): Campbell, K. , Cheng, J. , Fisher, A.J. , Manjunath, A.