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9D3M

Two hmgn2s in complex with the nucleosome

PDB DOI: 10.2210/pdb9d3m/pdb

Classification: GENE REGULATION/DNA
Organism(s): Homo Sapiens , Xenopus Borealis

Deposited: 2024-08-11
Deposition Author(s): Alegrio Louro, J. , Cruz-Becerra, G. , Kadonaga, J.T. , Leschziner, A.E.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

9d3m
Literature

Two hmgn2s in complex with the nucleosome

Alegrio Louro, J. , Cruz-Becerra, G. , Kadonaga, J.T. , Leschziner, A.E.

Primary Citation of Related Structures: 9D3M


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5S rDNA (noncoding strand) i 101 NA AAGACCCTGGCATGGGGAGGAGCTGGGCCCCCCCCAGAAGGCAGCACAAGGGGAGGAAAAGTCAGCCTTGTGCTCGCCTACGGCCATACCACCCTGAAAGT
5S rDNA (coding strand) j 101 NA ACTTTCAGGGTGGTATGGCCGTAGGCGAGCACAAGGCTGACTTTTCCTCCCCTTGTGCTGCCTTCTGGGGGGGGCCCAGCTCCTCCCCATGCCAGGGTCTT

Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 99 Homo Sapiens , Xenopus Borealis KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 99 Homo Sapiens , Xenopus Borealis KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 82 Homo Sapiens , Xenopus Borealis VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 82 Homo Sapiens , Xenopus Borealis VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 2-A C 103 Homo Sapiens , Xenopus Borealis KSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLP
Histone H2A type 2-A G 103 Homo Sapiens , Xenopus Borealis KSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLP
Histone H2B type 1-M D 93 Homo Sapiens , Xenopus Borealis RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS
Histone H2B type 1-M H 93 Homo Sapiens , Xenopus Borealis RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS
Non-histone chromosomal protein HMG-17 K 6 Homo Sapiens , Xenopus Borealis RRSARL
Non-histone chromosomal protein HMG-17 L 6 Homo Sapiens , Xenopus Borealis RRSARL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-11
Deposition Author(s): Alegrio Louro, J. , Cruz-Becerra, G. , Kadonaga, J.T. , Leschziner, A.E.