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9CMI

Cryo-em structure of human claudin-4 complex with clostridium perfringens enterotoxin, sfab cop-1, and nanobody

PDB DOI: 10.2210/pdb9cmi/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Clostridium Perfringens , Homo Sapiens , Synthetic Construct

Deposited: 2024-07-15
Deposition Author(s): Vecchio, A.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.83 Å

Literature

Cryo-em structure of human claudin-4 complex with clostridium perfringens enterotoxin, sfab cop-1, and nanobody

Vecchio, A.J.

Primary Citation of Related Structures: 9CMI


Proteins
Molecule Chains Sequence Length Organism Sequence
Claudin-4 A 211 Clostridium Perfringens , Homo Sapiens , Synthetic Construct GSMASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGLLCCNCPPRTDKPYSAKYSAARSAAASNYV
Heat-labile enterotoxin B chain B 299 Clostridium Perfringens , Homo Sapiens , Synthetic Construct TPINITNSNSNLSDGLYVIDKGDGWILGEPSVVSSQILNPNETGTFSQSLTKSKEVSINVNFSVGFTSEFIQASVEYGFGITIGEQNTIERSVSTTAGPNEYVYYKVYATYRKYQAIRISHGNISDDGSIYKLTGIWLSKTSADSLGNIDQGSLIETGERCVLTVPSTDIEKEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKFGLVPR
COP-1 sFab Heavy Chain H 261 Clostridium Perfringens , Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWFHPWWWWEYLFRGAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Anti-Fab Nanobody K 121 Clostridium Perfringens , Homo Sapiens , Synthetic Construct GSVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
COP-1 sFab Light Chain L 238 Clostridium Perfringens , Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-15
Deposition Author(s): Vecchio, A.J.