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FASTA Sequence PDB Format mmCIF Format
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9CMC

Crystal structure of the peanut allergen ara h 2 with two human derived fab antibodies 22s1 and 23p34

PDB DOI: 10.2210/pdb9cmc/pdb

Classification: ALLERGEN
Organism(s): Arachis Hypogaea , Homo Sapiens

Deposited: 2024-07-14
Deposition Author(s): Min, J. , Mueller, G.A. , Pedersen, L.C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.95 Å

Literature

Crystal structure of the peanut allergen ara h 2 with two human derived fab antibodies 22s1 and 23p34

Min, J. , Mueller, G.A. , Pedersen, L.C.

Primary Citation of Related Structures: 9CMC


Proteins
Molecule Chains Sequence Length Organism Sequence
Fab 23P34 heavy chain A 225 Arachis Hypogaea , Homo Sapiens QVQLVESGGLVVQPGGSLRLSCEASGFTFDDYTMHWVRQSPQKGLEWVSLIRWDGSRTEYADSVKGRFTISRDNSKNSLYLQMNTLRADDSAFYFCVKDGGLRYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 23P34 heavy chain F 225 Arachis Hypogaea , Homo Sapiens QVQLVESGGLVVQPGGSLRLSCEASGFTFDDYTMHWVRQSPQKGLEWVSLIRWDGSRTEYADSVKGRFTISRDNSKNSLYLQMNTLRADDSAFYFCVKDGGLRYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 23P34 heavy chain K 225 Arachis Hypogaea , Homo Sapiens QVQLVESGGLVVQPGGSLRLSCEASGFTFDDYTMHWVRQSPQKGLEWVSLIRWDGSRTEYADSVKGRFTISRDNSKNSLYLQMNTLRADDSAFYFCVKDGGLRYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 23P34 heavy chain P 225 Arachis Hypogaea , Homo Sapiens QVQLVESGGLVVQPGGSLRLSCEASGFTFDDYTMHWVRQSPQKGLEWVSLIRWDGSRTEYADSVKGRFTISRDNSKNSLYLQMNTLRADDSAFYFCVKDGGLRYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 23P34 light chain B 218 Arachis Hypogaea , Homo Sapiens DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGIHYLDWYLQKPGQSPQLLIYLGSKRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 23P34 light chain G 218 Arachis Hypogaea , Homo Sapiens DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGIHYLDWYLQKPGQSPQLLIYLGSKRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 23P34 light chain L 218 Arachis Hypogaea , Homo Sapiens DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGIHYLDWYLQKPGQSPQLLIYLGSKRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 23P34 light chain Q 218 Arachis Hypogaea , Homo Sapiens DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGIHYLDWYLQKPGQSPQLLIYLGSKRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 22S1 heavy chain C 228 Arachis Hypogaea , Homo Sapiens QVQLVQSGGGLVKPGGSLRLSCTASGFSFSDSYMSWIRQAPGKGLEWLTYISGSGEIISYADSVKGRFTISRDNAKKSVYLQMDSLRAEDTAVYYCARPSDYFETSEELDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 22S1 heavy chain H 228 Arachis Hypogaea , Homo Sapiens QVQLVQSGGGLVKPGGSLRLSCTASGFSFSDSYMSWIRQAPGKGLEWLTYISGSGEIISYADSVKGRFTISRDNAKKSVYLQMDSLRAEDTAVYYCARPSDYFETSEELDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 22S1 heavy chain M 228 Arachis Hypogaea , Homo Sapiens QVQLVQSGGGLVKPGGSLRLSCTASGFSFSDSYMSWIRQAPGKGLEWLTYISGSGEIISYADSVKGRFTISRDNAKKSVYLQMDSLRAEDTAVYYCARPSDYFETSEELDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 22S1 heavy chain R 228 Arachis Hypogaea , Homo Sapiens QVQLVQSGGGLVKPGGSLRLSCTASGFSFSDSYMSWIRQAPGKGLEWLTYISGSGEIISYADSVKGRFTISRDNAKKSVYLQMDSLRAEDTAVYYCARPSDYFETSEELDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Fab 22S1 light chain D 214 Arachis Hypogaea , Homo Sapiens EIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPNLLIYAASSLHSGVPSRFRGSGSGTDFTLTITSLQPDDFATYYCHQSYSAPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 22S1 light chain I 214 Arachis Hypogaea , Homo Sapiens EIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPNLLIYAASSLHSGVPSRFRGSGSGTDFTLTITSLQPDDFATYYCHQSYSAPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 22S1 light chain N 214 Arachis Hypogaea , Homo Sapiens EIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPNLLIYAASSLHSGVPSRFRGSGSGTDFTLTITSLQPDDFATYYCHQSYSAPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 22S1 light chain V 214 Arachis Hypogaea , Homo Sapiens EIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPNLLIYAASSLHSGVPSRFRGSGSGTDFTLTITSLQPDDFATYYCHQSYSAPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Ara h 2 allergen E 140 Arachis Hypogaea , Homo Sapiens GSAAAELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDVESGGRDRY
Ara h 2 allergen J 140 Arachis Hypogaea , Homo Sapiens GSAAAELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDVESGGRDRY
Ara h 2 allergen O 140 Arachis Hypogaea , Homo Sapiens GSAAAELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDVESGGRDRY
Ara h 2 allergen T 140 Arachis Hypogaea , Homo Sapiens GSAAAELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDVESGGRDRY
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-07-14
Deposition Author(s): Min, J. , Mueller, G.A. , Pedersen, L.C.