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FASTA Sequence PDB Format mmCIF Format
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9CGV

Sars-cov-2 nsp12 niran domain bound to a covalent inhibitor sw090466-1

PDB DOI: 10.2210/pdb9cgv/pdb

Classification: VIRAL PROTEIN/RNA/INHIBITOR
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2024-07-01
Deposition Author(s): Hernandez, G. , Osinski, A. , Tagliabracci, V.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

9cgv
Literature

Sars-cov-2 nsp12 niran domain bound to a covalent inhibitor sw090466-1

Hernandez, G. , Osinski, A. , Tagliabracci, V.S.

Primary Citation of Related Structures: 9CGV


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase nsp12 A 948 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MGSSHHHHHHENLYFQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
Non-structural protein 8 B 198 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 8 D 198 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 7 C 83 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct SKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA primer p 35 NA CGCGUAGCAUGCUACGUCAUUCUCCUAAGAAGCUG
RNA template t 55 NA CUAUCCCCAUGUGAGCGGCUCAGCUUCUUAGGAGAAUGACGUAGCAUGCUACGCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-01
Deposition Author(s): Hernandez, G. , Osinski, A. , Tagliabracci, V.S.