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9CG4

Cryo-em structure of fan1, pcna and dna substrate with (cag)2 extrusion in intermediate state

PDB DOI: 10.2210/pdb9cg4/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-06-28
Deposition Author(s): Li, F. , Pluciennik, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.37 Å

9cg4
Literature

Cryo-em structure of fan1, pcna and dna substrate with (cag)2 extrusion in intermediate state

Li, F. , Pluciennik, A.

Primary Citation of Related Structures: 9CG4


Proteins
Molecule Chains Sequence Length Organism Sequence
Proliferating cell nuclear antigen B 261 Homo Sapiens , Synthetic Construct MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEEGS
Proliferating cell nuclear antigen C 261 Homo Sapiens , Synthetic Construct MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEEGS
Proliferating cell nuclear antigen D 261 Homo Sapiens , Synthetic Construct MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEEGS
Fanconi-associated nuclease 1 E 183 Homo Sapiens , Synthetic Construct HPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRAKALAGQSVRICKGPRAVFSRILLLFSL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*GP*AP*AP*TP*TP*TP*CP*TP*AP*GP*AP*CP*TP*CP*GP*AP*GP*AP*TP*CP*AP*G)-3') a 23 NA CGAATTTCTAGACTCGAGATCAG
DNA (5'-D(P*AP*TP*CP*TP*CP*GP*AP*GP*TP*CP*TP*AP*GP*AP*AP*AP*TP*TP*CP*G)-3') f 20 NA ATCTCGAGTCTAGAAATTCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-28
Deposition Author(s): Li, F. , Pluciennik, A.