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FASTA Sequence PDB Format mmCIF Format
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9CFA

Germline-targeting hiv-1 gp120 engineered outer domain eodgt8 in complex with fab eod-cl04.1

PDB DOI: 10.2210/pdb9cfa/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2024-06-27
Deposition Author(s): Sarkar, A. , Stanfield, R.L. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.06 Å

9cfa
Literature

Germline-targeting hiv-1 gp120 engineered outer domain eodgt8 in complex with fab eod-cl04.1

Sarkar, A. , Stanfield, R.L. , Wilson, I.A.

Primary Citation of Related Structures: 9CFA


Proteins
Molecule Chains Sequence Length Organism Sequence
Fab eOD-CL04.1 lambda light chain L 215 Homo Sapiens , Human Immunodeficiency Virus 1 QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGFYPSWFQQKPGQTPRTLIYSTNNKHSWTPARFSGSLLGGKAALTLSGVQPEDEADYYCLLYYGGVWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Fab eOD-CL04.1 lambda light chain A 215 Homo Sapiens , Human Immunodeficiency Virus 1 QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGFYPSWFQQKPGQTPRTLIYSTNNKHSWTPARFSGSLLGGKAALTLSGVQPEDEADYYCLLYYGGVWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Fab eOD-CL04.1 lambda light chain E 215 Homo Sapiens , Human Immunodeficiency Virus 1 QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGFYPSWFQQKPGQTPRTLIYSTNNKHSWTPARFSGSLLGGKAALTLSGVQPEDEADYYCLLYYGGVWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Fab eOD-CL04.1 heavy chain H 219 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGLVEPGGSLRLSCAASGFNFSNYGMNWVRQAPGKGLECISYISGSSSTKYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARDHWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Fab eOD-CL04.1 heavy chain B 219 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGLVEPGGSLRLSCAASGFNFSNYGMNWVRQAPGKGLECISYISGSSSTKYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARDHWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Fab eOD-CL04.1 heavy chain F 219 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGLVEPGGSLRLSCAASGFNFSNYGMNWVRQAPGKGLECISYISGSSSTKYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARDHWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
germline-targeting HIV-1 gp120 engineered outer domain eODgt8 C 183 Homo Sapiens , Human Immunodeficiency Virus 1 ETGDTITLPCRPAPPPHCSSNITGLILTRQGGYSNANTVIFRPSGGDWRDIARCQIAGTVVSTQLFLNGSLAEEEVVIRSEDWRDNAKSICVQLATSVEIACTGAGHCAISRAKWANTLKQIASKLREQYGAKTIIFKPSSGGDPEFVNHSFNCGGEFFYCASTQLFASTWFASTGTHHHHHH
germline-targeting HIV-1 gp120 engineered outer domain eODgt8 D 183 Homo Sapiens , Human Immunodeficiency Virus 1 ETGDTITLPCRPAPPPHCSSNITGLILTRQGGYSNANTVIFRPSGGDWRDIARCQIAGTVVSTQLFLNGSLAEEEVVIRSEDWRDNAKSICVQLATSVEIACTGAGHCAISRAKWANTLKQIASKLREQYGAKTIIFKPSSGGDPEFVNHSFNCGGEFFYCASTQLFASTWFASTGTHHHHHH
germline-targeting HIV-1 gp120 engineered outer domain eODgt8 G 183 Homo Sapiens , Human Immunodeficiency Virus 1 ETGDTITLPCRPAPPPHCSSNITGLILTRQGGYSNANTVIFRPSGGDWRDIARCQIAGTVVSTQLFLNGSLAEEEVVIRSEDWRDNAKSICVQLATSVEIACTGAGHCAISRAKWANTLKQIASKLREQYGAKTIIFKPSSGGDPEFVNHSFNCGGEFFYCASTQLFASTWFASTGTHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-06-27
Deposition Author(s): Sarkar, A. , Stanfield, R.L. , Wilson, I.A.