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FASTA Sequence PDB Format mmCIF Format
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9CF2

Parasitella parasitica fanzor (ppfz) state 3

PDB DOI: 10.2210/pdb9cf2/pdb

Classification: RNA BINDING PROTEIN/ISOMERASE/RNA/DNA
Organism(s): Parasitella Parasitica , Saccharomyces Cerevisiae , Synthetic Construct

Deposited: 2024-06-27
Deposition Author(s): Saito, M. , Xu, P. , Zhang, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.15 Å

9cf2
Literature

Parasitella parasitica fanzor (ppfz) state 3

Saito, M. , Xu, P. , Zhang, F.

Primary Citation of Related Structures: 9CF2


Proteins
Molecule Chains Sequence Length Organism Sequence
Peptidyl-prolyl cis-trans isomerase C 162 Parasitella Parasitica , Saccharomyces Cerevisiae , Synthetic Construct MSQVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL
Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1 P 1259 Parasitella Parasitica , Saccharomyces Cerevisiae , Synthetic Construct MKSSHHHHHHHHHHGSSMKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNSSSNNNNNNNNNNLGIEENLYFQSNAEAESDDDFQPPIIRRKRSSRENTQQSGSQKRLKGKDKEIVADDNPILNTTTLDDYDYDDFQPPVVKRPDIGESSSSVNPTFFAAESSTRASHTSNNTPNTPSKRVITIKTTIKGIWKYDYRQPLYDLVHTTNLLVTHTYAFTKYIFLKELATDENFAFNELITKDFFVEVFLSLVSAKAGNSERLKDTTKRYRSLIGKHKDAYFEDAKYTPISLAYAQQIALYECAKVQTAYFNNMKAHFGNRLRALINKLFKKKEKVESLTKEMEANNFSIKEIKQAIRKNVYQPCNQVKLAITKKNMPESGLLDDKSVTQLNEFFSMYAVDYTFQKESIFYDVVANPEKHFKAFYKLAQLSEAYEVKPFACFPLRRTFIPCYMTVDSKILNYHILKNKKVLKMDEKFNAWGRVVNLERKAFKSQGCKKTLHFQGTLETDGVGVSILKQNTDTNRKSVMPKKPLEDIDDETKYIEKLEDAELKQTLGKCVLMDPGRRDLLYCMKETSRADKKEIMIFTKNDRSKCSRHFRRLRKLLQPSQIREAETYLSGFATKSVNMEKFVEYIQARASVKDILYEYYGNETAKSITEFYPESQFDFKVDQKCNLYYENLFVAKIRGFYPQPEHEPNDITLKSHMYHTYLQIMLNQKHISERLNSEKRRKIEDLAKAILEQPHESGHKTTISSLLGKLRLLPFRKMKFSTKLFSDNNDRKLVKNIKKKFGADAVLVLGNWSAPNTKYQDPTRNKGLRRMLKKNGFPLYLIDEFRTSSFCPKCESDLEKFKVIPNPRPHNQEKQPKVLCHGLLRCKNMSCLEQQTSEGNQRLWNRDQAAVLNFRKILNCLRETKQRPPLFSREPSKN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA non-target strand n 57 NA TACCCGGGATAAACATCCAGCAAACAGAGCTCGTTCAAAAACTAATTTCCTTTTGAC
DNA target strand t 57 NA GTCAAAAGGAAATTAGTTTTTGAACGAGCTCTGTTTGCTGGATGTTTATCCCGGGTA
Parasitella parasitica Fanzor 1 omegaRNA w 61 NA UUAUCCACCAAAGUUAUCGCUUUGGUCAAUUAAUGCAGGUAAGCAACAUCCAGCAAACAGA
DNA substrate model x 11 NA AAAAAAAAAAA
DNA substrate model y 12 NA TTTTTTTTTTTT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-27
Deposition Author(s): Saito, M. , Xu, P. , Zhang, F.