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FASTA Sequence PDB Format mmCIF Format
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9CDB

Cryoem structure of crispr associated effector, carf-adenosine deaminase 1, cad1, in ca6 (partial density) bound form with atp (partial density).

PDB DOI: 10.2210/pdb9cdb/pdb

Classification: ANTIVIRAL PROTEIN/RNA
Organism(s): Bacteroidales Bacterium

Deposited: 2024-06-24
Deposition Author(s): Majumder, P. , Patel, D.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

9cdb
Literature

Cryoem structure of crispr associated effector, carf-adenosine deaminase 1, cad1, in ca6 (partial density) bound form with atp (partial density).

Majumder, P. , Patel, D.J.

Primary Citation of Related Structures: 9CDB


Proteins
Molecule Chains Sequence Length Organism Sequence
Adenosine deaminase domain-containing protein A 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN
Adenosine deaminase domain-containing protein B 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN
Adenosine deaminase domain-containing protein C 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN
Adenosine deaminase domain-containing protein D 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN
Adenosine deaminase domain-containing protein E 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN
Adenosine deaminase domain-containing protein F 600 Bacteroidales Bacterium MSRVLLCSAGHSSMVVPEAFHAVPEGFEEVHVFTTDSEKFNPVVLNDFFHSLPNVRFSITKCHGLADILNERDFEFYQEMLWQWYLTKMPDNELPYVCLSGGIKSMSASLQKAATLFGAQSVFHVLADNNPRNIEEMFDALQKGQIHFIEMGYEPGWAALRRLKKILPINEGCSRDNFKPLISKSIEEILSNVKIMASDTGKSNQLPFPSLAILPPIAQQWLQLPLSANDGAWIQNLPKVDLHCHLGGFATSGSLLDQVRGAASEPDLIDRTFSPQEIAGWPRSHKSISLDKYMELGNANGSKLLKDKGCLIRQVELLYQSLVNDNVAYAEIRCSPNNYADKNKNRSAWVVLQDINDTFTRLITEAKQKNQFYCHVNLLVIASRKFSGDLSDISKHLALAITAMQQGEGVCRIVGVDLAGFENKETRASYYEHDFKAVHRCGLAVTAHAGENDDPEGIWQAVYSLHARRLGHALNLLEAPDLMRTVIERKIGVEMCPYANYQIKGFAPMPNFSALYPLKKYLEAGILVSVNTDNIGISGANLSENLLILADLCPGISRMDVLTIIRNSIETAFISHDFRMELLKFFDRKIYDVCLISIKN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') h 6 NA AAAAAA
RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') i 6 NA AAAAAA
RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') j 6 NA AAAAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-24
Deposition Author(s): Majumder, P. , Patel, D.J.