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FASTA Sequence PDB Format mmCIF Format
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9CBN

Hastv1 spike in complex with neutralizing fabs 3h4 and 3b4

PDB DOI: 10.2210/pdb9cbn/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Astrovirus 1 , Mus Musculus

Deposited: 2024-06-19
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Lanning, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.33 Å

9cbn
Literature

Hastv1 spike in complex with neutralizing fabs 3h4 and 3b4

Balasco Serrao, V.H. , Dubois, R.M. , Lanning, S.

Primary Citation of Related Structures: 9CBN


Proteins
Molecule Chains Sequence Length Organism Sequence
HAstV1 neutralizing Fab 3B4 heavy chain A 225 Human Astrovirus 1 , Mus Musculus QVQLHQPGAELVKPGASVNLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSSGRANYNEKFKNKATLTVDKSSITAYMHLSSLTSEDSAVYYCHWDYYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPR
HAstV1 neutralizing Fab 3B4 kappa chain B 214 Human Astrovirus 1 , Mus Musculus DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLFKSASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQTNSWPLTFGTGTKLDLKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Structural protein C 228 Human Astrovirus 1 , Mus Musculus MGEEYKVVLTFGSPMSPNANNKQTWVNKPLDAPSGHYNVKIAKDVDHYLTMQGFTSIASVDWYTIDFQPSEAPAPIKGLQVLVNISKKADVYAVKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTYTAGISFTQGGWYLLTNTSIVDGAMPPGWVWNNVELKTNTAYHMDKGLVHLIMPLPESTQMCYEMLTSIPAAAELALVPR
Structural protein D 228 Human Astrovirus 1 , Mus Musculus MGEEYKVVLTFGSPMSPNANNKQTWVNKPLDAPSGHYNVKIAKDVDHYLTMQGFTSIASVDWYTIDFQPSEAPAPIKGLQVLVNISKKADVYAVKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTYTAGISFTQGGWYLLTNTSIVDGAMPPGWVWNNVELKTNTAYHMDKGLVHLIMPLPESTQMCYEMLTSIPAAAELALVPR
HAstV1 neutralizing Fab 3H4 heavy chain E 228 Human Astrovirus 1 , Mus Musculus QVQLKESGPGLVAPSQSLSISCTVSGFSLTTFGIHWIRQPPGKGLEWLGVIWAAGTTNYNSTLKSRLTITKDNSRSQVFLKMNSLQTYDTAIYYCVREDYDYFFGLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPR
HAstV1 neutralizing Fab 3H4 heavy chain G 228 Human Astrovirus 1 , Mus Musculus QVQLKESGPGLVAPSQSLSISCTVSGFSLTTFGIHWIRQPPGKGLEWLGVIWAAGTTNYNSTLKSRLTITKDNSRSQVFLKMNSLQTYDTAIYYCVREDYDYFFGLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPR
HAstV1 neutralizing Fab 3H4 lambda chain F 217 Human Astrovirus 1 , Mus Musculus QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFIGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTDDEAIYFCALWFSNHWVFGGGTKLTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
HAstV1 neutralizing Fab 3H4 lambda chain H 217 Human Astrovirus 1 , Mus Musculus QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFIGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTDDEAIYFCALWFSNHWVFGGGTKLTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-19
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Lanning, S.