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FASTA Sequence PDB Format mmCIF Format
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9C53

Cryo-em structure of the strand displacement complex (ii) of yeast mitochondrial dna polymerase gamma (mip1) with downstream dna

PDB DOI: 10.2210/pdb9c53/pdb

Classification: Transferase/DNA
Organism(s): Saccharomyces Cerevisiae , Synthetic Construct

Deposited: 2024-06-05
Deposition Author(s): Nayak, A.R. , Sedmen, J. , Sillamaa, S. , Sokolova, V.O. , Temiakov, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.6 Å

Literature

Cryo-em structure of the strand displacement complex (ii) of yeast mitochondrial dna polymerase gamma (mip1) with downstream dna

Nayak, A.R. , Sedmen, J. , Sillamaa, S. , Sokolova, V.O. , Temiakov, D.

Primary Citation of Related Structures: 9C53


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase gamma A 1240 Saccharomyces Cerevisiae , Synthetic Construct MASTKKNTAEAPRINPVGIQYLGESLQRQVFGSCGGKDEVEQSDKLMELSKKSLKDHGLWGKKTLITDPISFPLPPLQGRSLDEHFQKIGRFNSEPYKSFCEDKFTEMVARPAEWLRKPGWVKYVPGMAPVEVAYPDEELVVFDVETLYNVSDYPTLATALSSTAWYLWCSPFICGGDDPAALIPLNTLNKEQVVIGHNVAYDRARVLEEYNFRDSKAFFLDTQSLHIASFGLCSRQRPMFMKNNKKKEAEVESEVHPEISIEDYDDPWLNVSALNSLKDVAKFHCKIDLDKTDRDFFASTDKSTIIENFQKLVNYCATDVTATSQVFDKIFPVFLKKCPHPVSFAGLKSLSKCILPTKLNDWNDYLNSSESLYQQSKVQIESKIVQIIKDIALLKDKPDFYLKDPWLSQLDWTTKPLRLTKKGVPAKCQKLPGFPEWYRQLFPSKDTVEPKITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPHEQVETYKAKNYVLADSVSQEEEEIRMNNLGLQCTGVLFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQSQFVVPNCKFPNEFQSLSAKSSLNNEKTNDLAIIIPKIVPMGTITRRAVENTWLTASNAKANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDSIFNVHGGTAIGWMCLEGTKNEGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLYENTKGKTKRSKLFKKFWYGGSESILFNKLESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYIIKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAFFSQVDIDSVIRKEVNMDCITPSNKTAIPHGEALDINQLLDKPNSKLGKPSLDIDSKVSQYAYNYREPVFEEYNKSYTPEFLKYFLAMQVQSDKRDVNRLEDEYLRECTSKEYARDGNTAEYSLLDYIKDVEKGKRTKVRIMGSNFLDGTKNAKADQRIRLPVNMPDYPTLHKIANDSAIPEKQLLENRRKKENRIDDENKKKLTRKKNTTPMERKYKRVYGGRKAFEAFYECANKPLDYTLETEKQFFNIPIDGVIDDVLNDKSNYKKKPSQARTASSSPIRKTAKAVHSKKLPARKSSTTNRNLVELERDITISREYKLAAALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Non-Template DNA n 23 NA TTTTGGTAGTCGTGACTCGACCG
Primer DNA p 23 NA GAAGACAGTCTGCGGCGCGCGGG
Template DNA t 42 NA CGGTCGAGAGTCACGACTACCCGCGCGCCGCAGACTGTCTTC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-05
Deposition Author(s): Nayak, A.R. , Sedmen, J. , Sillamaa, S. , Sokolova, V.O. , Temiakov, D.