9BNK
Cryo-em structure of rhesus antibody v031-a.01 in complex with hiv-1 env bg505 ds-sosip
PDB DOI: 10.2210/pdb9bnk/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta
Deposited: 2024-05-02 Deposition Author(s): Kwong, P.D. , Roark, R.S. , Shapiro, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.1 Å
Cryo-em structure of rhesus antibody v031-a.01 in complex with hiv-1 env bg505 ds-sosip
Kwong, P.D. , Roark, R.S. , Shapiro, L.
Primary Citation of Related Structures: 9BNK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| V031-a.01 heavy chain | H | 248 | Human Immunodeficiency Virus 1 , Macaca Mulatta | LVTLKESGPALVTPTQTLTLTCTLSGFSLTTTGMRVNWIRQAPGKALEWLARIDYNEARFYSSSLKTRLSISTDASKNQVVLRMTNMAPVDTGTYYCARSQQHYYEDAYTFDWYYFHSRDNGLDSWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGLEVLFQ |
| V031-a.01 light chain | L | 219 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGYTHLSWYLQKPGQSPQLLISLVSNRASGVPDRFSGSGSGTDFTLKLNRVEAEDVGLYYCMQGLQTPYTFGQGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC |
| Human immunodeficiency virus 1 envelope glycoprotein Gp120 | G | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVV |
| Human immunodeficiency virus 1 envelope glycoprotein Gp120 | E | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVV |
| Human immunodeficiency virus 1 envelope glycoprotein Gp120 | F | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVV |
| Envelope glycoprotein Gp41 | B | 147 | Human Immunodeficiency Virus 1 , Macaca Mulatta | VFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope glycoprotein Gp41 | C | 147 | Human Immunodeficiency Virus 1 , Macaca Mulatta | VFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope glycoprotein Gp41 | A | 147 | Human Immunodeficiency Virus 1 , Macaca Mulatta | VFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-05-02 Deposition Author(s): Kwong, P.D. , Roark, R.S. , Shapiro, L.