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FASTA Sequence PDB Format mmCIF Format
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9BIO

Structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer

PDB DOI: 10.2210/pdb9bio/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2024-04-23
Deposition Author(s): Gorman, J. , Kwong, P.D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.83 Å

9bio
Literature

Structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer

Gorman, J. , Kwong, P.D.

Primary Citation of Related Structures: 9BIO


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp41 B 170 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Envelope glycoprotein gp41 A 170 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Envelope glycoprotein gp41 J 170 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Envelope glycoprotein gp160 G 478 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp160 C 478 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp160 K 478 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
3BNC117 heavy chain S 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 heavy chain D 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 heavy chain M 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 light chain U 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 light chain E 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 light chain N 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRC44.01 light chain L 107 Homo Sapiens , Human Immunodeficiency Virus 1 AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK
VRC44.01 light chain F 107 Homo Sapiens , Human Immunodeficiency Virus 1 AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK
VRC44.01 light chain O 107 Homo Sapiens , Human Immunodeficiency Virus 1 AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK
VRC44.01 heavy chain H 124 Homo Sapiens , Human Immunodeficiency Virus 1 QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST
VRC44.01 heavy chain I 124 Homo Sapiens , Human Immunodeficiency Virus 1 QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST
VRC44.01 heavy chain P 124 Homo Sapiens , Human Immunodeficiency Virus 1 QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-23
Deposition Author(s): Gorman, J. , Kwong, P.D.