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9BEI

Cryo-em structure of synthetic claudin-4 complex with clostridium perfringens enterotoxin c-terminal domain, sfab cop-2, and nanobody

PDB DOI: 10.2210/pdb9bei/pdb

Classification: MEMBRANE PROTEIN/IMMUNE SYSYTEM
Organism(s): Clostridium Perfringens , Synthetic Construct

Deposited: 2024-04-15
Deposition Author(s): Vecchio, A.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.16 Å

9bei
Literature

Cryo-em structure of synthetic claudin-4 complex with clostridium perfringens enterotoxin c-terminal domain, sfab cop-2, and nanobody

Vecchio, A.J.

Primary Citation of Related Structures: 9BEI


Proteins
Molecule Chains Sequence Length Organism Sequence
Claudin-4 A 196 Clostridium Perfringens , Synthetic Construct MSSLETFREARRLAREGLELVREAARLPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQCKVYDSLLALPEDLRRARESFERAIEVAEKALELLEIGDPDSDAIEDEEERLQTIHEAGELLLKAAELAREPTEAIADRIIQDFYNPLVASGQKREMGASLALARRGAELLEEAGRKLLGLEGGSLEHHHHHH
Heat-labile enterotoxin B chain B 129 Clostridium Perfringens , Synthetic Construct MSTDIEKEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKF
COP-2 Fab Heavy chain H 237 Clostridium Perfringens , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Anti-fab nanobody K 121 Clostridium Perfringens , Synthetic Construct GSVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
COP-2 Fab Light chain L 216 Clostridium Perfringens , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-15
Deposition Author(s): Vecchio, A.J.