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9BE6

Cryo-em structure of human nucleosome collected by leginon on krios at 3.0 angstrom resolution

PDB DOI: 10.2210/pdb9be6/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-04-14
Deposition Author(s): Jia, L. , Olsen, S.K. , Ruben, E.A. , Wasmuth, E.V.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

9be6
Literature

Cryo-em structure of human nucleosome collected by leginon on krios at 3.0 angstrom resolution

Jia, L. , Olsen, S.K. , Ruben, E.A. , Wasmuth, E.V.

Primary Citation of Related Structures: 9BE6


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 97 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Histone H4 B 83 Homo Sapiens , Synthetic Construct KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1 C 103 Homo Sapiens , Synthetic Construct TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK
Histone H2B type 1-J D 95 Homo Sapiens , Synthetic Construct KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H3.2 E 97 Homo Sapiens , Synthetic Construct HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 F 78 Homo Sapiens , Synthetic Construct NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E G 105 Homo Sapiens , Synthetic Construct AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK
Histone H2B type 1-J H 93 Homo Sapiens , Synthetic Construct TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (145-MER) j 145 NA ATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT
DNA (145-MER) i 145 NA ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-14
Deposition Author(s): Jia, L. , Olsen, S.K. , Ruben, E.A. , Wasmuth, E.V.