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9BDU

Nf-kappab rela homo-dimer bound to at-centric kappab dna

PDB DOI: 10.2210/pdb9bdu/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2024-04-12
Deposition Author(s): Biswas, T. , Ghosh, G. , Huang, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.03 Å

9bdu
Literature

Nf-kappab rela homo-dimer bound to at-centric kappab dna

Biswas, T. , Ghosh, G. , Huang, D.

Primary Citation of Related Structures: 9BDU


Proteins
Molecule Chains Sequence Length Organism Sequence
Transcription factor p65 A 287 Mus Musculus , Synthetic Construct MPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR
Transcription factor p65 B 287 Mus Musculus , Synthetic Construct MPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3') c 19 NA ACTGGGAAATTCCAGTGAT
DNA (5'-D(P*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*TP*TP*TP*CP*CP*CP*AP*GP*T)-3') d 19 NA ATCACTGGAATTTCCCAGT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-04-12
Deposition Author(s): Biswas, T. , Ghosh, G. , Huang, D.