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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9B2M

Hemagglutinin h1 new caledonia 1999 in complex with monoclonal antibody fab 43_s0008

PDB DOI: 10.2210/pdb9b2m/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina

Deposited: 2024-03-15
Deposition Author(s): Ataca, S. , De Paiva Froes Rocha, R. , Kanekiyo, M. , Torrents De La Pena, A. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.09 Å

9b2m
Literature

Hemagglutinin h1 new caledonia 1999 in complex with monoclonal antibody fab 43_s0008

Ataca, S. , De Paiva Froes Rocha, R. , Kanekiyo, M. , Torrents De La Pena, A. , Ward, A.B.

Primary Citation of Related Structures: 9B2M


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 chain C 339 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina MKAKLLVLLCTFTATYADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISKESWSYIVETPNPENGTCYPGYFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTGVSASCSHNGKSSFYRNLLWLTGKNGLYPNLSKSYVNNKEKEVLVLWGVHHPPNIGNQRALYHTENAYVSVVSSHYSRRFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPWYAFALSRGFGSGIITSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA1 chain A 339 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina MKAKLLVLLCTFTATYADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISKESWSYIVETPNPENGTCYPGYFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTGVSASCSHNGKSSFYRNLLWLTGKNGLYPNLSKSYVNNKEKEVLVLWGVHHPPNIGNQRALYHTENAYVSVVSSHYSRRFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPWYAFALSRGFGSGIITSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA1 chain G 339 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina MKAKLLVLLCTFTATYADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISKESWSYIVETPNPENGTCYPGYFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTGVSASCSHNGKSSFYRNLLWLTGKNGLYPNLSKSYVNNKEKEVLVLWGVHHPPNIGNQRALYHTENAYVSVVSSHYSRRFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPWYAFALSRGFGSGIITSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA2 chain D 226 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina IQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNNECMESVKNGTYDYPKYSEESKLNREKIDGVKLESMGVYQILAIYSTVASSLVLLVSLGAISFWMCSNGSLQCRICI
Hemagglutinin HA2 chain B 226 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina IQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNNECMESVKNGTYDYPKYSEESKLNREKIDGVKLESMGVYQILAIYSTVASSLVLLVSLGAISFWMCSNGSLQCRICI
Hemagglutinin HA2 chain I 226 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina IQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNNECMESVKNGTYDYPKYSEESKLNREKIDGVKLESMGVYQILAIYSTVASSLVLLVSLGAISFWMCSNGSLQCRICI
Heavy chain monoclonal antibody Fab 3_S0008 H 233 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina QVQLVQSGAEVKKPGSSVKVSCKASGGTFRTFGISWVRQAPGQGLEWMGWIIPIIGTPNYAQKFQGRVIITADESSNTAYMELNSLKSEDTAVYYCAKEGRALLRYFDWLPLDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Heavy chain monoclonal antibody Fab 3_S0008 E 233 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina QVQLVQSGAEVKKPGSSVKVSCKASGGTFRTFGISWVRQAPGQGLEWMGWIIPIIGTPNYAQKFQGRVIITADESSNTAYMELNSLKSEDTAVYYCAKEGRALLRYFDWLPLDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Heavy chain monoclonal antibody Fab 3_S0008 J 233 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina QVQLVQSGAEVKKPGSSVKVSCKASGGTFRTFGISWVRQAPGQGLEWMGWIIPIIGTPNYAQKFQGRVIITADESSNTAYMELNSLKSEDTAVYYCAKEGRALLRYFDWLPLDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Light chain monoclonal antibody Fab 3_S0008 L 220 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina DIVLTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Light chain monoclonal antibody Fab 3_S0008 F 220 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina DIVLTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Light chain monoclonal antibody Fab 3_S0008 K 220 Streptomyces Hygroscopicus Subsp. Limoneus , Melampsora Larici-Populina DIVLTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-15
Deposition Author(s): Ataca, S. , De Paiva Froes Rocha, R. , Kanekiyo, M. , Torrents De La Pena, A. , Ward, A.B.