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FASTA Sequence PDB Format mmCIF Format
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9AR7

Cryoem structure of thermocas9 bound with target dna strand only

PDB DOI: 10.2210/pdb9ar7/pdb

Classification: DNA BINDING PROTEIN/DNA/RNA
Organism(s): Geobacillus Thermodenitrificans , Synthetic Construct

Deposited: 2024-02-22
Deposition Author(s): Li, H. , Shu, Y. , Zhao, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.52 Å

9ar7
Literature

Cryoem structure of thermocas9 bound with target dna strand only

Li, H. , Shu, Y. , Zhao, Y.

Primary Citation of Related Structures: 9AR7


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
single guide RNA b 149 NA GGUAGGAUGGCAAGAUCCUGGUAGUCAUAGUUCCCCUGGAAACAGGGUUACUAUGAUAAGGGCUUUCUGCCUAUAGGCAGACUGACCCGUGGCGUUGGGGAUCGCCUAUCGCCCGCUUUCUUCGGGCAUUCCCCACUCUUAGGCGUUUU
cleaved 3' target DNA strand c 40 NA AGCTTGGTGTATACCAGGATCTTGCCATCCTACCTCTAGA
cleaved 5' target strand p 14 NA AGCTTGGTGTATAC

Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 1082 Geobacillus Thermodenitrificans , Synthetic Construct MKYKIGLDIGITSIGWAVINLDIPRIEDLGVRIFDRAENPKTGESLALPRRLARSARRRLRRRKHRLERIRRLFVREGILTKEELNKLFEKKHEIDVWQLRVEALDRKLNNDELARILLHLAKRRGFRSNRKSERTNKENSTMLKHIEENQSILSSYRTVAEMVVKDPKFSLHKRNKEDNYTNTVARDDLEREIKLIFAKQREYGNIVCTEAFEHEYISIWASQRPFASKDDIEKKVGFCTFEPKEKRAPKATYTFQSFTVWEHINKLRLVSPGGIRALTDDERRLIYKQAFHKNKITFHDVRTLLNLPDDTRFKGLLYDRNTTLKENEKVRFLELGAYHKIRKAIDSVYGKGAAKSFRPIDFDTFGYALTMFKDDTDIRSYLRNEYEQNGKRMENLADKVYDEELIEELLNLSFSKFGHLSLKALRNILPYMEQGEVYSTACERAGYTFTGPKKKQKTVLLPNIPPIANPVVMRALTQARKVVNAIIKKYGSPVSIHIELARELSQSFDERRKMQKEQEGNRKKNETAIRQLVEYGLTLNPTGLDIVKFKLWSEQNGKCAYSLQPIEIERLLEPGYTEVDHVIPYSRSLDDSYTNKVLVLTKENREKGNRTPAEYLGLGSERWQQFETFVLTNKQFSKKKRDRLLRLHYDENEENEFKNRNLNDTRYISRFLANFIREHLKFADSDDKQKVYTVNGRITAHLRSRWNFNKNREESNLHHAVDAAIVACTTPSDIARVTAFYQRREQNKELSKKTDPQFPQPWPHFADELQARLSKNPKESIKALNLGNYDNEKLESLQPVFVSRMPKRSITGAAHQETLRRYIGIDERSGKIQTVVKKKLSEIQLDKTGHFPMYGKESDPRTYEAIRQRLLEHNNDPKKAFQEPLYKPKKNGELGPIIRTIKIIDTTNQVIPLNDGKTVAYNSNIVRVDVFEKDGKYYCVPIYTIDMMKGILPNKAIEPNKPYSEWKEMTEDYTFRFSLYPNDLIRIEFPREKTIKTAVGEEIKIKDLFAYYQTIDSSNGGLSLVSHDNNFSLRSIGSRTLKRFEKYQVDVLGNIYKVRGEKRVGVASSSHSKAGETIRPL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-22
Deposition Author(s): Li, H. , Shu, Y. , Zhao, Y.