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FASTA Sequence PDB Format mmCIF Format
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8ZPP

Local cryoem structure of the sars-cov-2 ba.5 in complex with orb10 fab

PDB DOI: 10.2210/pdb8zpp/pdb

Classification: VIRAL PROTEIN
Organism(s): Enterobacter Aerogenes , Gammaretrovirus

Deposited: 2024-05-30
Deposition Author(s): Cao, S. , Hu, H. , Leng, C.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Literature

Local cryoem structure of the sars-cov-2 ba.5 in complex with orb10 fab

Cao, S. , Hu, H. , Leng, C.

Primary Citation of Related Structures: 8ZPP


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein,Fibritin A 1260 Enterobacter Aerogenes , Gammaretrovirus MFVFLVLLPLVSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLGRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGGGGGSGGGGSHHHHHH
variable heavy chain of ORB10 Fab H 119 Enterobacter Aerogenes , Gammaretrovirus QVQLQQSGAELVRPGSSVKISCKASGYAFSNYWMNWVKQRPGEGLEWIGQIYPGDGDTDYNGKFKGRATLTADKSSSTAYMQLSSLTSEDSAVYFCARGDDGYYVYFDYWGQGTTLTVS
variable light chain of ORB10 Fab L 108 Enterobacter Aerogenes , Gammaretrovirus EIVLTQSPALMAASPGEKVTITCSVSSSIGSNNLHWYQQKSETSPKPWIYGTSNLASGVPVRFSGSGSGTSYSLTISTMEAEDAATYYCQQWSGYPLTFGGGTKLEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-30
Deposition Author(s): Cao, S. , Hu, H. , Leng, C.