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FASTA Sequence PDB Format mmCIF Format
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8ZJR

Structure of nucleosome-bound rfx5 complex

PDB DOI: 10.2210/pdb8zjr/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-05-15
Deposition Author(s): Han, Y. , Tian, Y. , Xu, K. , Xue, W. , Yin, Y. , Zhang, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

8zjr
Literature

Structure of nucleosome-bound rfx5 complex

Han, Y. , Tian, Y. , Xu, K. , Xue, W. , Yin, Y. , Zhang, Y.

Primary Citation of Related Structures: 8ZJR


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 138 Homo Sapiens , Synthetic Construct GPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 138 Homo Sapiens , Synthetic Construct GPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 107 Homo Sapiens , Synthetic Construct MADLMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 107 Homo Sapiens , Synthetic Construct MADLMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 132 Homo Sapiens , Synthetic Construct GPMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 132 Homo Sapiens , Synthetic Construct GPMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-K D 130 Homo Sapiens , Synthetic Construct MADLMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-K H 130 Homo Sapiens , Synthetic Construct MADLMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
DNA-binding protein RFX5 M 148 Homo Sapiens , Synthetic Construct MGSSHHHHHENLYFQGSDNDKLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPEM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (147-MER) i 147 NA ATCCACACGTTACACGACGCTCTTCCGATCTTGGTTAGGGTGCAAGCATGATCCCTTCGATGAATAGAGCCGACTGGGCATAGTAACGCGTGGGTTGGTGAGGTGGTTCACGGTCATGCCGCTTGGGTAAGCAGATCGGAAGAGGAT
DNA (147-MER) j 147 NA ATCCTCTTCCGATCTGCTTACCCAAGCGGCATGACCGTGAACCACCTCACCAACCCACGCGTTACTATGCCCAGTCGGCTCTATTCATCGAAGGGATCATGCTTGCACCCTAACCAAGATCGGAAGAGCGTCGTGTAACGTGTGGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-15
Deposition Author(s): Han, Y. , Tian, Y. , Xu, K. , Xue, W. , Yin, Y. , Zhang, Y.