Crystal structure of mjhku4r-cov-1 rbd bound to mjdpp4
PDB DOI: 10.2210/pdb8ze6/pdb
Classification: VIRAL PROTEIN Organism(s): Manis Javanica , Pangolin Coronavirus Hku4
Deposited: 2024-05-04 Deposition Author(s): Li, Z. , Xu, Y. , Yang, M. , Zhang, S.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Dipeptidyl peptidase 4 | B | 728 | Manis Javanica , Pangolin Coronavirus Hku4 | RRTYTLTDYLKNTFRVKFYSLRWVSDHEYLYKQENNILLFNAEYGNSSIFLENSTFDEFGHSINDYSVSPDGQFILFEYNYVKKWRHSYTASYDIYDLHKRQLITEERIPNNTQWITWSPVGHKLAYVWHNDIYIKKEPNLQSQRITWTGKEDVIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTMQVPYPKAGAANPTVKLFVVNTDSLNSTANATSVQVVPPASVLIGDHYLCDVTWVNEERISLQWLRRIQNYSVLAICDYDKPTGRWASHVRQQHIESSTTGWVGRFKPSEPHFTSDGNSFYKIISNKEGYKHICHFQVDRENCTFITKGVWEVIGIEALTSDDLYYISNEYKGMPGGRNLYKIQLNDHTKVTCLSCELNTERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSSNDKELRVLEDNSALDKMLQDVQMPSKKLDFIIWNGIKLWYQMILPPHFDKLKKYPLLIDVYAGPCSQKADTVFRLNWATYLASTEKIIVASFDGRGSGYQGDKILHAINRRLGTLEVEDQIEAARQFTNMGFVDEKRIAIWGWSYGGYVTSMVLGAGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLEHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPE |
| Dipeptidyl peptidase 4 | D | 728 | Manis Javanica , Pangolin Coronavirus Hku4 | RRTYTLTDYLKNTFRVKFYSLRWVSDHEYLYKQENNILLFNAEYGNSSIFLENSTFDEFGHSINDYSVSPDGQFILFEYNYVKKWRHSYTASYDIYDLHKRQLITEERIPNNTQWITWSPVGHKLAYVWHNDIYIKKEPNLQSQRITWTGKEDVIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTMQVPYPKAGAANPTVKLFVVNTDSLNSTANATSVQVVPPASVLIGDHYLCDVTWVNEERISLQWLRRIQNYSVLAICDYDKPTGRWASHVRQQHIESSTTGWVGRFKPSEPHFTSDGNSFYKIISNKEGYKHICHFQVDRENCTFITKGVWEVIGIEALTSDDLYYISNEYKGMPGGRNLYKIQLNDHTKVTCLSCELNTERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSSNDKELRVLEDNSALDKMLQDVQMPSKKLDFIIWNGIKLWYQMILPPHFDKLKKYPLLIDVYAGPCSQKADTVFRLNWATYLASTEKIIVASFDGRGSGYQGDKILHAINRRLGTLEVEDQIEAARQFTNMGFVDEKRIAIWGWSYGGYVTSMVLGAGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLEHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPE |
| Spike glycoprotein | C | 203 | Manis Javanica , Pangolin Coronavirus Hku4 | DKECDFTPMLVGVPPQVYNFKRLVFTNCNYNLTKLLSLFMVNEFSCNGISPDAIARGCYSSLTVDYFAYPLSMRSYIQPGSAGDISLYNYKQSFANPTCRVLATAPANLTLTKPSAYGYFQKCSRVSGEHNSVETPLYINPGEYSICRSFSPYGFSEDGEVFRRQLTQYEGGGILVGVGAKLAMTDKLEMGFIISVQYGTDTN |
| Spike glycoprotein | A | 203 | Manis Javanica , Pangolin Coronavirus Hku4 | DKECDFTPMLVGVPPQVYNFKRLVFTNCNYNLTKLLSLFMVNEFSCNGISPDAIARGCYSSLTVDYFAYPLSMRSYIQPGSAGDISLYNYKQSFANPTCRVLATAPANLTLTKPSAYGYFQKCSRVSGEHNSVETPLYINPGEYSICRSFSPYGFSEDGEVFRRQLTQYEGGGILVGVGAKLAMTDKLEMGFIISVQYGTDTN |
Method: X-RAY DIFFRACTION