Cryo-em structure of mycobacteriophage douge genome-free connector (gp5, gp9, gp10, gp12 and gp13)
PDB DOI: 10.2210/pdb8zdl/pdb
Classification: VIRAL PROTEIN Organism(s): Mycolicibacterium Smegmatis Mc2 155
Deposited: 2024-05-02 Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.
Cryo-em structure of mycobacteriophage douge genome-free connector (gp5, gp9, gp10, gp12 and gp13)
Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.
Primary Citation of Related Structures: 8ZDL
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Adaptor Protein (gp9) | A | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | B | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | C | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | D | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | E | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | F | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | G | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | H | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | I | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | J | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | K | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Adaptor Protein (gp9) | L | 154 | Mycolicibacterium Smegmatis Mc2 155 | MAGLATIDELQTLMSTVFEDDALEQAQLVLDIVSSWARVVSGQMWPDAPANVPDDVRAVVLQASRRELKNPDRVISRQMGPFNVQYSQPPDGFFYPAELAILKRFKRSGGLMTVSTSRGEEGRPWAGKTAYIRYGDGLFPFCSEDEGYGDVVPW |
Terminator Protein (gp12) | M | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Terminator Protein (gp12) | N | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Terminator Protein (gp12) | O | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Terminator Protein (gp12) | P | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Terminator Protein (gp12) | Q | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Terminator Protein (gp12) | R | 167 | Mycolicibacterium Smegmatis Mc2 155 | MAVVLPDWYEEAFVNVENLFIDMFTDLLPDYESGCWAPDDWLADEIEVKPTIWFFRLPGGRVDWDGRKDECQLQVMVVTGSRDDSWRLMDFVRAMLLPMQGDKYKMADGYTAQIRCAGEVAGPQLLTPGQRIDTRVVTATFKVSVSMKSAKNYKQKLYELWQALRGS |
Tail Tube Protein (gp13) | S | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Tail Tube Protein (gp13) | T | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Tail Tube Protein (gp13) | U | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Tail Tube Protein (gp13) | V | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Tail Tube Protein (gp13) | W | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Tail Tube Protein (gp13) | X | 300 | Mycolicibacterium Smegmatis Mc2 155 | MTDFYTIKDAQADLAIAPLNLTVLLAPYSTTPATTLESPTDGSLAIPPGYKSVGHFEKQAGLTLGNEFDSKDIEAYGEPEPIRTIINKRTTTFDFAMYQNQRNVLELIWTQDFSNIQPSEFGGIVLEAPKVPKNIYYRAILVGMDDRNDRPIWLYWLMPKVKLDKLDNQTLNDDNVIEYKPTLKAFRDDVVGYSVAQGFAGPGWRDLVATAGFGEALTALTITPGSPTVTVATGASHTAQLLVEGDNGINYTPDVVFTSSAPDKASVSAAGLVTGVAAGSATITATKGALTATATVTVTA |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-05-02 Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.