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FASTA Sequence PDB Format mmCIF Format
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8ZDI

Cryo-em structure of mycobacteriophage douge genome-free capsid (gp8)

PDB DOI: 10.2210/pdb8zdi/pdb

Classification: VIRUS
Organism(s): Mycolicibacterium Smegmatis Mc2 155

Deposited: 2024-05-02
Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.58 Å

8zdi
Literature

Cryo-em structure of mycobacteriophage douge genome-free capsid (gp8)

Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.

Primary Citation of Related Structures: 8ZDI


Proteins
Molecule Chains Sequence Length Organism Sequence
Major Capsid Protein (gp8) A 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) B 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) C 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) D 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) E 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) F 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) G 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) H 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) I 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-02
Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.