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FASTA Sequence PDB Format mmCIF Format
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8ZDH

Cryo-em structure of mycobacteriophage douge genome-packed capsid (gp8 and gp113)

PDB DOI: 10.2210/pdb8zdh/pdb

Classification: VIRUS
Organism(s): Mycolicibacterium Smegmatis Mc2 155

Deposited: 2024-05-02
Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

8zdh
Literature

Cryo-em structure of mycobacteriophage douge genome-packed capsid (gp8 and gp113)

Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.

Primary Citation of Related Structures: 8ZDH


Proteins
Molecule Chains Sequence Length Organism Sequence
Major Capsid Protein (gp8) A 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) B 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) C 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) D 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) E 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) F 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) G 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) H 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Major Capsid Protein (gp8) I 382 Mycolicibacterium Smegmatis Mc2 155 MAHIFVKPELVAEIGVKQLQREIVLPGLVWTNPLTDFGGSKNDTITVRVPAITTANRRDLRDPDRTVIASELVEHSFGVTLDKHVYAALKFTDEQRTLDIRDYTKQVLMPQVSAVAYELEDYIAELIEGAPYEETILIDPADTVPAFITADQRMGEANVPTDSRRLVVGSAVAAALAKDKQFRHADWSGDQANAALREAHVGRLAGMNVIRSNAIAPDKAYLWHRTAFILAYRTPVVPEGAKAGASFSANGVALRWLADYDYSQLGDRTLLDVFTGRKVVTEVDGSFVRAVELQLQASSITIVGGAFALATTTGTKQLKVRDDNGTDVTARCTFASSAGTKATVSAAGLVTGVAAGTADITASYVPPQGGTAKTATVTVTVP
Capsid Cement Protein (gp113) J 49 Mycolicibacterium Smegmatis Mc2 155 MGLISDPVEVDPIQVGRDEAGWVQELRDREAWPKQEVPEQAKKPAKVGN
Capsid Cement Protein (gp113) K 49 Mycolicibacterium Smegmatis Mc2 155 MGLISDPVEVDPIQVGRDEAGWVQELRDREAWPKQEVPEQAKKPAKVGN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-02
Deposition Author(s): Ho, M.C. , Lowary, T.L. , Maharana, J. , Tsai, L.A. , Wang, C.H.