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8Z96

Crystal structure of crtago/tir-apaz in complex with guide dna and 21-nt target dna

PDB DOI: 10.2210/pdb8z96/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Thermoflavifilum Thermophilum , Synthetic Construct

Deposited: 2024-04-22
Deposition Author(s): Chen, J. , Hu, R. , Liu, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.36 Å

8z96
Literature

Crystal structure of crtago/tir-apaz in complex with guide dna and 21-nt target dna

Chen, J. , Hu, R. , Liu, L.

Primary Citation of Related Structures: 8Z96


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi domain-containing protein A 507 Thermoflavifilum Thermophilum , Synthetic Construct MKELIYIEEPSILFAHGQKCTDPRDGLALFGPLNQIYGIKSGVVGTQKGLQIFKSYLDKIQKPIYNHNNITRPMFPGFEAVFGCKWESQNIVFKEITDEEIRRYLFNASTHKRTYDLVTLFNDKIITANKNDEERVDVWFVIVPEEIYKYCRPNSVLPNELVQTKSLISKSKAKSFRYTPTLFEEFNKKLKEVEKEAKTYNYDAQFHDQLKARLLEHTIPTQILRESTLAWRDFKNTFGAPIRDFSKIEGHLAWTISTAAYYKAGGKPWKLGDIRPGVCYLGLVYKKIEKSKNPQNACCAAQMFLDNGDGTVFKGEVGPWYNPEKGEYHLKPKEAKALLTQALESYKEQNKSYPKEVFIHARTRFNDEEWNAFNEVTPKNTNLVGVTITKSKPLKLYKTEGAFPIMRGNAYIVDEKKAFLWTLGFVPKLQSTLSMEVPNPIFIEINKGEAEIQQVLKDILALTKLNYNACIYADGEPVTLRFANKIGEILTASTEIKTPPLAFKYYI
TIR domain-containing protein B 421 Thermoflavifilum Thermophilum , Synthetic Construct MRNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIEKEIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAIDENLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPKKPPDHSKSNLLYQQIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTLAFPAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDTDFIRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKDKFEKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKSKSIQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILISNKPLKFFGKMSYVTPSE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3') c 21 NA TGAGGTAGTAGGTTGTATAGT
DNA (5'-D(*CP*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*AP*T)-3') d 21 NA CTATACAACCTACTACCTCAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-04-22
Deposition Author(s): Chen, J. , Hu, R. , Liu, L.