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FASTA Sequence PDB Format mmCIF Format
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8Z90

Cryo-em structure of thogoto virus polymerase in transcription initiation conformation 2

PDB DOI: 10.2210/pdb8z90/pdb

Classification: TRANSCRIPTION
Organism(s): Thogoto Virus (Isolate Siar 126) , Synthetic Construct

Deposited: 2024-04-22
Deposition Author(s): Chang, T. , Chen, X. , He, J. , Li, M. , Li, Z. , Xiong, X. , Xue, L. , Zhao, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å

8z90
Literature

Cryo-em structure of thogoto virus polymerase in transcription initiation conformation 2

Chang, T. , Chen, X. , He, J. , Li, M. , Li, Z. , Xiong, X. , Xue, L. , Zhao, H.

Primary Citation of Related Structures: 8Z90


Proteins
Molecule Chains Sequence Length Organism Sequence
Polymerase acidic protein A 622 Thogoto Virus (Isolate Siar 126) , Synthetic Construct MTDRPDHIDSRVWELSETQEDWITQVHGHVRRVVECWKYTICCLISNMHTHRGAPQYDVFKWQDRSTIEWICSKKKVQYPERDTPDLYDNERAVAYKVLLVSDLSDHSPTSGIYHDLAFNLEGEAEESCALVLRGSQLQDIKGFLCRALEWVVSNNLTQEVVETISGEAKLQFSVGTTFRTLLKRDTDWDVIPTPRVEPNVPRIEGRRWTQMKKLPLLKEKEGPPSPWRALLLGADSEYIVCPPGTDQEAISWIHSQSEIECIRESKSTPASVITCLTSSLQSFAEGNPVRSRIHEDIIAFGINKKQEKKQSASSSASGEWKRAEYQVEEMSLPPWVEEEMVLLRSDQEDNWIELEKNAIYTEVDGVAEGLVDKYIEIVGRTKVASVIEKWQIAATRTFSQLHTDRSRITACPIITRDPSGNCQFWGMVLLGPHHVKRDTDNAPLLIAEIMGEDTEEKYPKHSVFSLKVEEKQFLLSLKITSFSRNKLYTFSNIRRVLIQPASIYSQVVLSRAAENNSLNLEVNPEIQLYLEGAQRGMTLYQWVRMILCLEFLMAIYNNPQMEGFLANMRRLHMSRHAMMERRQVFLPFGSRPEDKVNECIINNPIVAYLAKGWNSMPNVYY
RNA-directed RNA polymerase catalytic subunit B 710 Thogoto Virus (Isolate Siar 126) , Synthetic Construct MNLFTPLSEINPTTTQELLYAYTGPAPVAYGTRTRAVLENIIRPYQYFYKEPNVQRALDIKTGCKEPEDINVEGPSSGFHTASVLKLADNFFRKYRPAMEKLKYWILVKLPKLKYAELSKGRQTYSFIHKRNLPAPIALEETVEFLEQNLRRKIGPTLLSYCQAIADVMELDETTYEGARDPRPWDIQLEEIDSDEEDPLFRQVGREETYTIKFSREELWDQMRTLNTMWKHLERGRLNRRTIATPSMLIRGFVKIVEDAAKEILENVPTSGVPVGGEEKLAKLASKQTFHTAVTGELSGDQEKFNECLDPDAMRLMWTVFLRKLGCPDWIMELFNIPFMVFKSKLADMGEGLVYTKGKLTDRKPLGEMPSEFDDLVRNVVGNSISCRLGMFMGMYNLTSTLLALISIEREELTGSHVESSDDFIHFFNCKTHEEMFKQAETLRLTLKLVGINMSPSKCILISPAGIGEFNSKFHHRDFVGNVATELPALVPNGTNPMTDLAMGLNVIKHSVNTGQMNLCTGALAMRIFNHAYKYAYMALGVTRRTRFMEENAITPLLTNQGASPVHSFSTMHLDEVALRRHLGLLDEETLRRILNPNNPVTQKGDPSMFFRIENKMPQIMEDYSVPSCFKYTLSRNRTIQDKPHKALLNKEERYQRVTSIINKLFPEVLIQEASAPGTVRESLKRRLELVVERSDLDEERKKRILSRIF
Polymerase basic protein 2 C 827 Thogoto Virus (Isolate Siar 126) , Synthetic Construct MDREEPAESECTLRALVEEYNGACKEAPKEMSKQFTDYNTFKRYTTSKKDHAPQMRLVYSVRKPWPISMTPSKEIPLVFNGTKLKDTILDLGESKRTRANIVVPDYWSKYGSQTSLEVVNAILYAEDLKVQRFFSTEWGEIRYGRMLPFRKPVQACPTIEEVNPASIPHTLLQVFCPQYTTLDSKRKAHMGAVEKLKRVMEPICKVQTQESAVHIARSLIDSNKKWLPTVVDHTPRTAEMAHFLCSKYHYVHTNTQDLSDTRSIDNLCGELVKRSLKCRCPKETLVANLDKITIQGRPMREVLADHDGELPYLGICRVAMGLSTHHTMKIRSTKFSILNSDHPRIEVKKVFSLSPDVQVTIPYRRFKGKAKVYFQNDQIQGYFSCTDRQIDEIKISAPKNAPLLEPLLDICYYGSFIEPGFEQTFGFYPAGKREFVDSFFMHHSKDHKAFLIHMGLDKDLSLPLSPELNWKEPALSKVCRVTELDSTVQPYTSATREFVLGETLNVYTQHENGLELLICPTEIRSTRGPLPPGTNLSGSEFIDIYQDPFSRAKSLLKSTILHAERCKEFVGNMLEEYQDPAETTVQSLVPINTWGKSAKRKLQEEITSDPDWHQCPRKRAKMSYLAIIAGSIQDRDKKQTNVPRAFMLRGSQIEYDMKATRGLVVDTTNRIIVGGETVLREGKGGPEGYVQTGVFEEQPRCYLVDTPDHGLSMGLSRFCVHSQGRYFQYEKKISIWEETDNIKATIDSQRDLKRRRDIEEMVSKRARIVLEVLFQGPGHHHHHHHHSADYKDDDDKGGWSHPQFEKGGGSGGGGSGGSAWSHPQFEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*GP*AP*GP*AP*AP*AP*UP*CP*AP*AP*GP*GP*CP*AP*GP*UP*U)-3') d 18 NA AGAGAAAUCAAGGCAGUU
RNA (5'-R(*GP*AP*CP*UP*GP*CP*CP*UP*GP*UP*UP*UP*UP*UP*GP*CP*U)-3') e 17 NA GACUGCCUGUUUUUGCU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-22
Deposition Author(s): Chang, T. , Chen, X. , He, J. , Li, M. , Li, Z. , Xiong, X. , Xue, L. , Zhao, H.