Structure of hiv-1 ch119 sosip.664 trimer in complex with cd4 molecules
PDB DOI: 10.2210/pdb8z7n/pdb
Classification: VIRUS Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2024-04-20 Deposition Author(s): Li, D. , Wang, T.
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
Envelope glycoprotein gp160 | A | 518 | Homo Sapiens , Human Immunodeficiency Virus 1 | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAVGNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQELVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLECSKVSNNETDKYNGTEEMKNCSFNATTVVRDRQQKVYALFYRLDIVPLTEKNSSENSSKYYRLINCNTSAITQACPKVSFEPIPIHYCTPAGYAILKCNDKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTILVHLNQSVEIVCTRPNNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISKWHETLKRVSEKLAEHFPNKTINFTSSSGGDLEITTHSFTCRGEFFYCNTSGLFNSTYMPNGTYLHGDTNSNSSITIPCRIKQIINMWQEVGRAMYAPPIEGNITCKSNITGLLLVRDGGTESNNTETNNTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTACKRRVVERRRRRR |
Envelope glycoprotein gp160 | D | 518 | Homo Sapiens , Human Immunodeficiency Virus 1 | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAVGNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQELVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLECSKVSNNETDKYNGTEEMKNCSFNATTVVRDRQQKVYALFYRLDIVPLTEKNSSENSSKYYRLINCNTSAITQACPKVSFEPIPIHYCTPAGYAILKCNDKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTILVHLNQSVEIVCTRPNNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISKWHETLKRVSEKLAEHFPNKTINFTSSSGGDLEITTHSFTCRGEFFYCNTSGLFNSTYMPNGTYLHGDTNSNSSITIPCRIKQIINMWQEVGRAMYAPPIEGNITCKSNITGLLLVRDGGTESNNTETNNTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTACKRRVVERRRRRR |
Envelope glycoprotein gp160 | G | 518 | Homo Sapiens , Human Immunodeficiency Virus 1 | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAVGNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQELVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLECSKVSNNETDKYNGTEEMKNCSFNATTVVRDRQQKVYALFYRLDIVPLTEKNSSENSSKYYRLINCNTSAITQACPKVSFEPIPIHYCTPAGYAILKCNDKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTILVHLNQSVEIVCTRPNNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISKWHETLKRVSEKLAEHFPNKTINFTSSSGGDLEITTHSFTCRGEFFYCNTSGLFNSTYMPNGTYLHGDTNSNSSITIPCRIKQIINMWQEVGRAMYAPPIEGNITCKSNITGLLLVRDGGTESNNTETNNTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTACKRRVVERRRRRR |
Envelope glycoprotein gp160 | B | 164 | Homo Sapiens , Human Immunodeficiency Virus 1 | AVGIGAVFLGFLGVAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQKEIWDNMTWMQWDKEISNYTNTIYKLLEDSQNQQESNEKDLLALDGGGGGHHHHHH |
Envelope glycoprotein gp160 | E | 164 | Homo Sapiens , Human Immunodeficiency Virus 1 | AVGIGAVFLGFLGVAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQKEIWDNMTWMQWDKEISNYTNTIYKLLEDSQNQQESNEKDLLALDGGGGGHHHHHH |
Envelope glycoprotein gp160 | H | 164 | Homo Sapiens , Human Immunodeficiency Virus 1 | AVGIGAVFLGFLGVAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQKEIWDNMTWMQWDKEISNYTNTIYKLLEDSQNQQESNEKDLLALDGGGGGHHHHHH |
T-cell surface glycoprotein CD4 | C | 401 | Homo Sapiens , Human Immunodeficiency Virus 1 | MNRGVPFRHLLLVLQLALLPAATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTWSTGSGHHHHHH |
T-cell surface glycoprotein CD4 | F | 401 | Homo Sapiens , Human Immunodeficiency Virus 1 | MNRGVPFRHLLLVLQLALLPAATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTWSTGSGHHHHHH |
T-cell surface glycoprotein CD4 | I | 401 | Homo Sapiens , Human Immunodeficiency Virus 1 | MNRGVPFRHLLLVLQLALLPAATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTWSTGSGHHHHHH |
Method: ELECTRON MICROSCOPY