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8Z2N

Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-pmdu) glycinyltransferase gp46/pugt from pseudomonads phage pamx11 in complex with dsdna

PDB DOI: 10.2210/pdb8z2n/pdb

Classification: TRANSFERASE/DNA
Organism(s): Cellulomonas Bogoriensis 69B4 = Dsm 16987 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-04-13
Deposition Author(s): Guo, W.T. , Wen, Y. , Wu, B.X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

Literature

Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-pmdu) glycinyltransferase gp46/pugt from pseudomonads phage pamx11 in complex with dsdna

Guo, W.T. , Wen, Y. , Wu, B.X.

Primary Citation of Related Structures: 8Z2N


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycinyltransferase B 292 Cellulomonas Bogoriensis 69B4 = Dsm 16987 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSRNYEKLSIEEFGAHLLGTVDLDPIYLALRRMELPEAQLNRWLLAYWCLYNGGEASYLSEFEGREFFEMLNHAAENVREAPIGGRWPRGAERRHWRGAQATSSVEYLIDRYDDRPEDMAAYCAGQGGTFLEVTKRVQEHRLFGPWIGFKVADMVDRVLGKPVSFDNAAVFMFKDPYKAACIQYEVNPNIPDHVLADGSVAPRNRELVTPETVHHVAQHLIEHFKGFQAPPLGDRPVNIQEVETILCKWKSHQNGHYPLFKDIVEIREAALPWAKVSKTAQAFFEAMPEVTQ
Glycinyltransferase CA00 292 Cellulomonas Bogoriensis 69B4 = Dsm 16987 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSRNYEKLSIEEFGAHLLGTVDLDPIYLALRRMELPEAQLNRWLLAYWCLYNGGEASYLSEFEGREFFEMLNHAAENVREAPIGGRWPRGAERRHWRGAQATSSVEYLIDRYDDRPEDMAAYCAGQGGTFLEVTKRVQEHRLFGPWIGFKVADMVDRVLGKPVSFDNAAVFMFKDPYKAACIQYEVNPNIPDHVLADGSVAPRNRELVTPETVHHVAQHLIEHFKGFQAPPLGDRPVNIQEVETILCKWKSHQNGHYPLFKDIVEIREAALPWAKVSKTAQAFFEAMPEVTQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*AP*GP*TP*CP*GP*TP*CP*GP*AP*CP*TP*A)-3') c 13 NA TAGTCGTCGACTA
DNA (5'-D(*TP*AP*GP*TP*CP*GP*AP*CP*GP*AP*CP*TP*A)-3') d 13 NA TAGTCGACGACTA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-04-13
Deposition Author(s): Guo, W.T. , Wen, Y. , Wu, B.X.