8YZZ
The structure of hla-a*2402 complex with peptide from sars-cov-2 s448-456 nynylyrlf(prototype)
PDB DOI: 10.2210/pdb8yzz/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2024-04-08 Deposition Author(s): Liu, J. , Shang, B.L. , Tian, J.M. , Zhang, J.N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.88 Å
The structure of hla-a*2402 complex with peptide from sars-cov-2 s448-456 nynylyrlf(prototype)
Liu, J. , Shang, B.L. , Tian, J.M. , Zhang, J.N.
Primary Citation of Related Structures: 8YZZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MHC class I antigen | A | 274 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
| Beta-2-microglobulin | B | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Spike protein S1 | E | 9 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | NYNYLYRLF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-04-08 Deposition Author(s): Liu, J. , Shang, B.L. , Tian, J.M. , Zhang, J.N.