PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YPT

Cryo-em structure of bfubb-butcd complex

PDB DOI: 10.2210/pdb8ypt/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Bacteroides Fragilis

Deposited: 2024-03-18
Deposition Author(s): Chen, Z. , Gao, X. , Xu, J.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.05 Å

8ypt
Literature

Cryo-em structure of bfubb-butcd complex

Chen, Z. , Gao, X. , Xu, J.H.

Primary Citation of Related Structures: 8YPT


Proteins
Molecule Chains Sequence Length Organism Sequence
Membrane protein A 423 Bacteroides Fragilis CDSYLDIRPVGSVIPQTAEEYRALLARAYLNVPNDRGLACLRSDEMLVNDNEYDRNSYGDIERWNDVSPFPGTSQFTWSNFYNVLFIANQVIESQKEITEGTPEVVNQLVGEAHLLRAYLHFVLVNLHGQPYTKSGALNSKSIPLKLDTDLEKTLGRNTVEEVYTSILSDIEHARELINKEKWETVFSYRFNVLSVDALQSRVSLYMGAWPKCLESAEAVLAKKSVLVDMNETPLALPNHFESVESITALEQVMGSSVNNAVWVPATFLALYQEGDKRLAAYFAAPDENGNRKSSKGGKREFSCTFRVGELYLNAAEAAANMDKLPHARMRLLELMRKRYTPEAYAKKENAVNVMDKNALISEILNERARELAFEGHRWFDLRRTTRPRMVKVLQGKTYILEQDDPRYTIPIPRDAIAANPGL
Membrane protein B 423 Bacteroides Fragilis CDSYLDIRPVGSVIPQTAEEYRALLARAYLNVPNDRGLACLRSDEMLVNDNEYDRNSYGDIERWNDVSPFPGTSQFTWSNFYNVLFIANQVIESQKEITEGTPEVVNQLVGEAHLLRAYLHFVLVNLHGQPYTKSGALNSKSIPLKLDTDLEKTLGRNTVEEVYTSILSDIEHARELINKEKWETVFSYRFNVLSVDALQSRVSLYMGAWPKCLESAEAVLAKKSVLVDMNETPLALPNHFESVESITALEQVMGSSVNNAVWVPATFLALYQEGDKRLAAYFAAPDENGNRKSSKGGKREFSCTFRVGELYLNAAEAAANMDKLPHARMRLLELMRKRYTPEAYAKKENAVNVMDKNALISEILNERARELAFEGHRWFDLRRTTRPRMVKVLQGKTYILEQDDPRYTIPIPRDAIAANPGL
TonB-linked outer membrane protein C 986 Bacteroides Fragilis DAVVVTGYQTVERRKLTAAVGKLNISDETIGAVKSIDQALAGQIAGLSVTSTSGAPGAPAKIRIRGTSSLNGTQDPLWVLDGIPLEGTDVPQSNVLNDVSNIQQSSIAGLNPADIENITVLKDAAATAIYGARAANGVIVITTKKGKVGKPVINFSSKFTYMPTLSTNRLNMLNSQEKVDLELELLRSNFAYGDNKGGVSKIISGYGLTDAYKKGGWSALTPEAQTDISRLRNTETDWGDILFRDAFNQEYSLSLSGGNERVTYYTSIGYYQENGNVKGVGLDRLNIVAKTSYKVNRMLKFGVSLFVNRRNNKTYLTDTYGLVNPVYYSRKANPYYQPFDANGNYVYDFDVQNNSDTDLGFNIFEERKNTSNEETINALSSIFDAELRFNDKLKFTTQLGLQLDKASKEQIADKESFSMRIIRKNSKYWDSASQSNKYFIPDGGVHKAYENTNSQITWKAMGEYRDSFNDIHELEVMVGTELRKTWYETLFSAGYGFDRQTLTTKPVVFPDEDRARQFPLHQKTYKENAYVSFFSTASYSLMNRYTFGGSIRFDGSDLFGVDKKYRYLPLYSVSGLWRLSNEPFMQGTRKWMDNLAFRVSYGIQGNIDKNTSPFLLGKYIVDNILPGGSEHMIDINSAPNKKLRWEKTQSVNVGLDFSVLNQALNLSVDYYYRKGTDLIGKQMLPLETGFVSTNINWASMVNKGVEVSLSTRNVATKNFSWYTNLNFAYNNNKVLREAIPEAQTIPGREGYPVDAIFAIKTAGLDEEGYPLFYDKEGKKVTLKELYRLQDPFGLGFTVNSDVTPAEERSFYSYIGSQDTPYTGGLINTFSYKNWELTANLSFNLGGYVRTTPSYNFINFDRGQNVNSDILDRWTPENTDGRLPALITSEKRADEYYWYDQKSEIYKNLDIWVKKLNYFRLQNLRLGYRLPEKMTKSLGMGSASVAIEGRNLLVFGSSYKNFLDPESMYNPYAPPIPKSITFSLNLN
TonB-linked outer membrane protein D 986 Bacteroides Fragilis DAVVVTGYQTVERRKLTAAVGKLNISDETIGAVKSIDQALAGQIAGLSVTSTSGAPGAPAKIRIRGTSSLNGTQDPLWVLDGIPLEGTDVPQSNVLNDVSNIQQSSIAGLNPADIENITVLKDAAATAIYGARAANGVIVITTKKGKVGKPVINFSSKFTYMPTLSTNRLNMLNSQEKVDLELELLRSNFAYGDNKGGVSKIISGYGLTDAYKKGGWSALTPEAQTDISRLRNTETDWGDILFRDAFNQEYSLSLSGGNERVTYYTSIGYYQENGNVKGVGLDRLNIVAKTSYKVNRMLKFGVSLFVNRRNNKTYLTDTYGLVNPVYYSRKANPYYQPFDANGNYVYDFDVQNNSDTDLGFNIFEERKNTSNEETINALSSIFDAELRFNDKLKFTTQLGLQLDKASKEQIADKESFSMRIIRKNSKYWDSASQSNKYFIPDGGVHKAYENTNSQITWKAMGEYRDSFNDIHELEVMVGTELRKTWYETLFSAGYGFDRQTLTTKPVVFPDEDRARQFPLHQKTYKENAYVSFFSTASYSLMNRYTFGGSIRFDGSDLFGVDKKYRYLPLYSVSGLWRLSNEPFMQGTRKWMDNLAFRVSYGIQGNIDKNTSPFLLGKYIVDNILPGGSEHMIDINSAPNKKLRWEKTQSVNVGLDFSVLNQALNLSVDYYYRKGTDLIGKQMLPLETGFVSTNINWASMVNKGVEVSLSTRNVATKNFSWYTNLNFAYNNNKVLREAIPEAQTIPGREGYPVDAIFAIKTAGLDEEGYPLFYDKEGKKVTLKELYRLQDPFGLGFTVNSDVTPAEERSFYSYIGSQDTPYTGGLINTFSYKNWELTANLSFNLGGYVRTTPSYNFINFDRGQNVNSDILDRWTPENTDGRLPALITSEKRADEYYWYDQKSEIYKNLDIWVKKLNYFRLQNLRLGYRLPEKMTKSLGMGSASVAIEGRNLLVFGSSYKNFLDPESMYNPYAPPIPKSITFSLNLN
Ubiquitin-like protein E 76 Bacteroides Fragilis MQVFIKNRYGWTITLEVSPTDTVENVKQKIQDKEGFPPDKIRLIYGGKQMEDGRTLADYNVQKDSTILICIRDVDC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-18
Deposition Author(s): Chen, Z. , Gao, X. , Xu, J.H.