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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YKF

The dsr2-dsad1 complex with dsad1 on the opposite sides

PDB DOI: 10.2210/pdb8ykf/pdb

Classification: IMMUNE SYSTEM
Organism(s): Bacillus Phage Spbc2 , Bacillus Subtilis

Deposited: 2024-03-05
Deposition Author(s): Yang, X. , Zheng, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.35 Å

8ykf
Literature

The dsr2-dsad1 complex with dsad1 on the opposite sides

Yang, X. , Zheng, J.

Primary Citation of Related Structures: 8YKF


Proteins
Molecule Chains Sequence Length Organism Sequence
SIR2-like domain-containing protein A 1005 Bacillus Phage Spbc2 , Bacillus Subtilis MVKVDLESKRYGEKLKEVFLMLDNNVVECIKEITESSRNGKLVFFVGAGVSTLSDYPQWWRLVDKYHEELYGSPKKGNYSSDEYLRIPQIFYNVKGEMAFDGILKDFFQVDKPTNPIHDKILAMNPAHVITTNYDNLIDTACWKRGKYFSVISAEEDVANATSSRYLLKVHGDFRKGFKGENVVLKEDDYLNYDQNYPLISNLMKTIIATHTIVFIGYGLGDYNINMLLNWVRKLQKDSFHKPFFIRTDPSPIENETLIYYENKGLRIIDAASLIDSNEYDYLERYSAVMDLLIESQENKFITKDDEVIDYIYGKISPLFALQYIRKIDLKHVFEYDYHFEVNGTVVRHKNKGFGYMERFFELKESCDERSKLSKKQYERFNALFNFFEKNGVICMAKDAGTLNTSIEINSLAYHGKYDVMKKFIEEQSVSIEDDYKKAFFLACLGRWEESYDLYSNIILNSIDESNGCVYYLSQINRYRIYQSITQAVTQFNGLGLLTFGRHYKPFTDEFLARIEREMTNFNIDDLFNGMPFEFQKKYKILEFLSDNQFLYDDTVKLFELTNKVRSEMSEGSYSFGMSSDIVVLLRLYDNLRFLYENCLWSVSFHEFHQYIRNSMSLLIEKAEYERTRDIDELGFSFFGKKSGFFMEYYDFVNISRHFKIDDIKNLERSCSIDKIRFGEQEKIEEYLVGIAEEITKQFSANGMNVVFYTQFISEAKAALYFAKYVKLSEEGLGKIVKALLFYFPERDLDIGKRYVWLERLTKCNELPKSIISIIDDFLVLQAEKHIDQNYSEVSSNGLYSRDYGALIKHFEKNFISKRLSEITLCLTQDKQKQIDFLFKLLPLLSTNAKSHLLSFKSVENINDLMNGIRIGLIDEFTPEHEELIIEYLETRKVNYIVEKEKGIQTFSSNDYMSTFGIWYFLEEINNSKMEEFIGMDDQYDFFVDPENFDYKKFIPSWLKNYNDKLLGKIAGNKHMKHHVIEVLKERVKNSNDKRYLEILMNYFI
SIR2-like domain-containing protein B 1005 Bacillus Phage Spbc2 , Bacillus Subtilis MVKVDLESKRYGEKLKEVFLMLDNNVVECIKEITESSRNGKLVFFVGAGVSTLSDYPQWWRLVDKYHEELYGSPKKGNYSSDEYLRIPQIFYNVKGEMAFDGILKDFFQVDKPTNPIHDKILAMNPAHVITTNYDNLIDTACWKRGKYFSVISAEEDVANATSSRYLLKVHGDFRKGFKGENVVLKEDDYLNYDQNYPLISNLMKTIIATHTIVFIGYGLGDYNINMLLNWVRKLQKDSFHKPFFIRTDPSPIENETLIYYENKGLRIIDAASLIDSNEYDYLERYSAVMDLLIESQENKFITKDDEVIDYIYGKISPLFALQYIRKIDLKHVFEYDYHFEVNGTVVRHKNKGFGYMERFFELKESCDERSKLSKKQYERFNALFNFFEKNGVICMAKDAGTLNTSIEINSLAYHGKYDVMKKFIEEQSVSIEDDYKKAFFLACLGRWEESYDLYSNIILNSIDESNGCVYYLSQINRYRIYQSITQAVTQFNGLGLLTFGRHYKPFTDEFLARIEREMTNFNIDDLFNGMPFEFQKKYKILEFLSDNQFLYDDTVKLFELTNKVRSEMSEGSYSFGMSSDIVVLLRLYDNLRFLYENCLWSVSFHEFHQYIRNSMSLLIEKAEYERTRDIDELGFSFFGKKSGFFMEYYDFVNISRHFKIDDIKNLERSCSIDKIRFGEQEKIEEYLVGIAEEITKQFSANGMNVVFYTQFISEAKAALYFAKYVKLSEEGLGKIVKALLFYFPERDLDIGKRYVWLERLTKCNELPKSIISIIDDFLVLQAEKHIDQNYSEVSSNGLYSRDYGALIKHFEKNFISKRLSEITLCLTQDKQKQIDFLFKLLPLLSTNAKSHLLSFKSVENINDLMNGIRIGLIDEFTPEHEELIIEYLETRKVNYIVEKEKGIQTFSSNDYMSTFGIWYFLEEINNSKMEEFIGMDDQYDFFVDPENFDYKKFIPSWLKNYNDKLLGKIAGNKHMKHHVIEVLKERVKNSNDKRYLEILMNYFI
SIR2-like domain-containing protein C 1005 Bacillus Phage Spbc2 , Bacillus Subtilis MVKVDLESKRYGEKLKEVFLMLDNNVVECIKEITESSRNGKLVFFVGAGVSTLSDYPQWWRLVDKYHEELYGSPKKGNYSSDEYLRIPQIFYNVKGEMAFDGILKDFFQVDKPTNPIHDKILAMNPAHVITTNYDNLIDTACWKRGKYFSVISAEEDVANATSSRYLLKVHGDFRKGFKGENVVLKEDDYLNYDQNYPLISNLMKTIIATHTIVFIGYGLGDYNINMLLNWVRKLQKDSFHKPFFIRTDPSPIENETLIYYENKGLRIIDAASLIDSNEYDYLERYSAVMDLLIESQENKFITKDDEVIDYIYGKISPLFALQYIRKIDLKHVFEYDYHFEVNGTVVRHKNKGFGYMERFFELKESCDERSKLSKKQYERFNALFNFFEKNGVICMAKDAGTLNTSIEINSLAYHGKYDVMKKFIEEQSVSIEDDYKKAFFLACLGRWEESYDLYSNIILNSIDESNGCVYYLSQINRYRIYQSITQAVTQFNGLGLLTFGRHYKPFTDEFLARIEREMTNFNIDDLFNGMPFEFQKKYKILEFLSDNQFLYDDTVKLFELTNKVRSEMSEGSYSFGMSSDIVVLLRLYDNLRFLYENCLWSVSFHEFHQYIRNSMSLLIEKAEYERTRDIDELGFSFFGKKSGFFMEYYDFVNISRHFKIDDIKNLERSCSIDKIRFGEQEKIEEYLVGIAEEITKQFSANGMNVVFYTQFISEAKAALYFAKYVKLSEEGLGKIVKALLFYFPERDLDIGKRYVWLERLTKCNELPKSIISIIDDFLVLQAEKHIDQNYSEVSSNGLYSRDYGALIKHFEKNFISKRLSEITLCLTQDKQKQIDFLFKLLPLLSTNAKSHLLSFKSVENINDLMNGIRIGLIDEFTPEHEELIIEYLETRKVNYIVEKEKGIQTFSSNDYMSTFGIWYFLEEINNSKMEEFIGMDDQYDFFVDPENFDYKKFIPSWLKNYNDKLLGKIAGNKHMKHHVIEVLKERVKNSNDKRYLEILMNYFI
SIR2-like domain-containing protein D 1005 Bacillus Phage Spbc2 , Bacillus Subtilis MVKVDLESKRYGEKLKEVFLMLDNNVVECIKEITESSRNGKLVFFVGAGVSTLSDYPQWWRLVDKYHEELYGSPKKGNYSSDEYLRIPQIFYNVKGEMAFDGILKDFFQVDKPTNPIHDKILAMNPAHVITTNYDNLIDTACWKRGKYFSVISAEEDVANATSSRYLLKVHGDFRKGFKGENVVLKEDDYLNYDQNYPLISNLMKTIIATHTIVFIGYGLGDYNINMLLNWVRKLQKDSFHKPFFIRTDPSPIENETLIYYENKGLRIIDAASLIDSNEYDYLERYSAVMDLLIESQENKFITKDDEVIDYIYGKISPLFALQYIRKIDLKHVFEYDYHFEVNGTVVRHKNKGFGYMERFFELKESCDERSKLSKKQYERFNALFNFFEKNGVICMAKDAGTLNTSIEINSLAYHGKYDVMKKFIEEQSVSIEDDYKKAFFLACLGRWEESYDLYSNIILNSIDESNGCVYYLSQINRYRIYQSITQAVTQFNGLGLLTFGRHYKPFTDEFLARIEREMTNFNIDDLFNGMPFEFQKKYKILEFLSDNQFLYDDTVKLFELTNKVRSEMSEGSYSFGMSSDIVVLLRLYDNLRFLYENCLWSVSFHEFHQYIRNSMSLLIEKAEYERTRDIDELGFSFFGKKSGFFMEYYDFVNISRHFKIDDIKNLERSCSIDKIRFGEQEKIEEYLVGIAEEITKQFSANGMNVVFYTQFISEAKAALYFAKYVKLSEEGLGKIVKALLFYFPERDLDIGKRYVWLERLTKCNELPKSIISIIDDFLVLQAEKHIDQNYSEVSSNGLYSRDYGALIKHFEKNFISKRLSEITLCLTQDKQKQIDFLFKLLPLLSTNAKSHLLSFKSVENINDLMNGIRIGLIDEFTPEHEELIIEYLETRKVNYIVEKEKGIQTFSSNDYMSTFGIWYFLEEINNSKMEEFIGMDDQYDFFVDPENFDYKKFIPSWLKNYNDKLLGKIAGNKHMKHHVIEVLKERVKNSNDKRYLEILMNYFI
DSAD1 E 120 Bacillus Phage Spbc2 , Bacillus Subtilis MIEIFKDTGATHDLVYHSKINTFVWDVEFDIVLSDSKELNKCYFVKCFNPYRINGKCDFAVSSIDIFSEGKRLLIENEFNFKITKAVHVATSKDVTEIVLHLSERISSPFPIVKEVVYLD
DSAD1 F 120 Bacillus Phage Spbc2 , Bacillus Subtilis MIEIFKDTGATHDLVYHSKINTFVWDVEFDIVLSDSKELNKCYFVKCFNPYRINGKCDFAVSSIDIFSEGKRLLIENEFNFKITKAVHVATSKDVTEIVLHLSERISSPFPIVKEVVYLD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-05
Deposition Author(s): Yang, X. , Zheng, J.