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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YHX

Cryo-em structure of the trimeric hera

PDB DOI: 10.2210/pdb8yhx/pdb

Classification: IMMUNE SYSTEM
Organism(s): Staphylococcus Aureus

Deposited: 2024-02-28
Deposition Author(s): Xiong, X. , Zhen, X. , Zhou, B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.81 Å

Literature

Cryo-em structure of the trimeric hera

Xiong, X. , Zhen, X. , Zhou, B.

Primary Citation of Related Structures: 8YHX


Proteins
Molecule Chains Sequence Length Organism Sequence
DUF87 domain-containing protein A 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
DUF87 domain-containing protein B 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
DUF87 domain-containing protein C 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
DUF87 domain-containing protein D 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
DUF87 domain-containing protein E 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
DUF87 domain-containing protein F 562 Staphylococcus Aureus MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVTIKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYPFLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGSGKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQDWINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTKILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNVSSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKSIVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQFNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLNSIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS
SIR2 family protein G 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein H 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein I 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein J 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein K 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein L 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein M 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein N 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein O 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein P 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein Q 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
SIR2 family protein R 428 Staphylococcus Aureus MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGSGCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERKALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQNGLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKSKVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQPVSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFREFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNFKNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-28
Deposition Author(s): Xiong, X. , Zhen, X. , Zhou, B.