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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YGE

Pp1192r-dna-m-amsa complex dna binding/cleavage domain

PDB DOI: 10.2210/pdb8yge/pdb

Classification: ISOMERASE/DNA
Organism(s): African Swine Fever Virus Pig/Kenya/Ken-50/1950 , Synthetic Construct

Deposited: 2024-02-26
Deposition Author(s): Liu, R.L. , Sun, J.Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.76 Å

8yge
Literature

Pp1192r-dna-m-amsa complex dna binding/cleavage domain

Liu, R.L. , Sun, J.Q.

Primary Citation of Related Structures: 8YGE


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA topoisomerase 2 A 1194 African Swine Fever Virus Pig/Kenya/Ken-50/1950 , Synthetic Construct METFEISDFKEHAKKKSMWAGALNKVTISGLMGVFTEDEDLMALPIHRDHCPALLKIFDELIVNATDHERACHNKTKKVTYIKISFDKGVFSCENDGPGIPIVKHEQASLIAKRDVYVPEVASCYFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILTTADGSQKYVQHINQRLDNIEPPTITPSREMFTRIELMPVYQELGYAQPLSETEQADLSAWIYLRACQCAAYVGKGTTIYYNDKPCSTSSVMALAKMYTLVTAPNSTIYTATIKADAKPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVKGEHVTFLKKAINEMVVKKFQQTIKDKNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMTRSIVDILLQSISKKDNHKQIDVDKYTRARNAGGKKAQDCMLLAAEGDSALSLLRAGLTLGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVDQDLDGCGKILGLLLAYFHLFWPQLIVHGFVKRLLTPLIRVYEKGNTVPVEFYYEQEFDAWAKKQTSLANHTVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTLDDSAKELFHIYFGGESELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRKILAGGLKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPTEDSWLLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHELLHYAIDHKITVLPLRPSNYNFKGHLKRFGQYYYSYGTYVVSEQRNMITITELPLRVPTVAYIESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIMEEFKETEEQNSIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRLIMETAIVRYINESADLNLSHYEDEKEAGRILSEHGFPPLNQSLITSPEFATIEELNQKALQGCYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQESPFPGASVWLEEIDAVEKAIIKGRNTQWKFHHH
DNA topoisomerase 2 B 1194 African Swine Fever Virus Pig/Kenya/Ken-50/1950 , Synthetic Construct METFEISDFKEHAKKKSMWAGALNKVTISGLMGVFTEDEDLMALPIHRDHCPALLKIFDELIVNATDHERACHNKTKKVTYIKISFDKGVFSCENDGPGIPIVKHEQASLIAKRDVYVPEVASCYFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILTTADGSQKYVQHINQRLDNIEPPTITPSREMFTRIELMPVYQELGYAQPLSETEQADLSAWIYLRACQCAAYVGKGTTIYYNDKPCSTSSVMALAKMYTLVTAPNSTIYTATIKADAKPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVKGEHVTFLKKAINEMVVKKFQQTIKDKNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMTRSIVDILLQSISKKDNHKQIDVDKYTRARNAGGKKAQDCMLLAAEGDSALSLLRAGLTLGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVDQDLDGCGKILGLLLAYFHLFWPQLIVHGFVKRLLTPLIRVYEKGNTVPVEFYYEQEFDAWAKKQTSLANHTVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTLDDSAKELFHIYFGGESELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRKILAGGLKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPTEDSWLLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHELLHYAIDHKITVLPLRPSNYNFKGHLKRFGQYYYSYGTYVVSEQRNMITITELPLRVPTVAYIESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIMEEFKETEEQNSIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRLIMETAIVRYINESADLNLSHYEDEKEAGRILSEHGFPPLNQSLITSPEFATIEELNQKALQGCYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQESPFPGASVWLEEIDAVEKAIIKGRNTQWKFHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (20-mer) c 20 NA GATTGGATAGCTATTCACGG
DNA (8-mer) d 8 NA CCGTGAAT
DNA (12-mer) e 12 NA AGCTATCCAATC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-26
Deposition Author(s): Liu, R.L. , Sun, J.Q.