8YFE
Cryo em structure of komagataella phaffii rat1-rai1 complex
PDB DOI: 10.2210/pdb8yfe/pdb
Classification: TRANSCRIPTION Organism(s): Komagataella Phaffii
Deposited: 2024-02-24 Deposition Author(s): Ehara, H. , Murayama, Y. , Sekine, S.I. , Yanagisawa, T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.47 Å
Cryo em structure of komagataella phaffii rat1-rai1 complex
Ehara, H. , Murayama, Y. , Sekine, S.I. , Yanagisawa, T.
Primary Citation of Related Structures: 8YFE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-3' exoribonuclease | A | 1006 | Komagataella Phaffii | MGVPALFRWLSRKYPKIISPVIQDEDVDIDGESRPTRYEDPNPNGELDNLYLDMNGIVHPCSHPEHKPVPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRFRSAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAAYKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLAAALIFLGLATHEPHFKILREDVFAQDKKSYSLQDQLRMTDIERQELKDKKTPFLWLHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVRDNSITTLVTIWKQILPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYEDEKRSLENQKRRKLAQEQSSARSQNAPNISTGKDKAPLTPNQNIPLYTTSGESVGIKMTDSEMVNNSALITKANEANKSIAELLKQNLQNEINKKRKISNEEQEVVKESVEEVVEEEDDVLVTSDPEDSSTEILIPKNEEIRLWEPGYRKRYYETKFHTKDPQKVKKIARNMVQKYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFRPYEQLMSVLPAASSHNLPDVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFIDENRLLKAVQSKYDQLTEDEKFRNTNRSEILVLGRSHSHYPTLVKELYEEGKDSYEFQVDSSGVSGVAIKLQSFDRSGVLRLPVKQLEGYRHYPDISNRDFLMVEFKQLPKSHAKSMILSGLIPHLRRLTQEDKDSILYGGTNFYGRNRFSPEENADFKQYIGPHGKSQYLPRQGGYKAFIQIHSDEAKGHRHGIYHGGSHTETEFRRGGGYHQHGNRGGRGGYQGNQGYQANSGGYQNSYQGSYQGGYRGGYQGGSQGRYQAGYQSGYQGGYQGEYKNGYQGGYQGNQGNQGYNRQTYNASKSGTLPMKRRHNSGPSSGLEVLFQ |
| 5'-3' exoribonuclease | C | 1006 | Komagataella Phaffii | MGVPALFRWLSRKYPKIISPVIQDEDVDIDGESRPTRYEDPNPNGELDNLYLDMNGIVHPCSHPEHKPVPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRFRSAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAAYKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLAAALIFLGLATHEPHFKILREDVFAQDKKSYSLQDQLRMTDIERQELKDKKTPFLWLHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVRDNSITTLVTIWKQILPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYEDEKRSLENQKRRKLAQEQSSARSQNAPNISTGKDKAPLTPNQNIPLYTTSGESVGIKMTDSEMVNNSALITKANEANKSIAELLKQNLQNEINKKRKISNEEQEVVKESVEEVVEEEDDVLVTSDPEDSSTEILIPKNEEIRLWEPGYRKRYYETKFHTKDPQKVKKIARNMVQKYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFRPYEQLMSVLPAASSHNLPDVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFIDENRLLKAVQSKYDQLTEDEKFRNTNRSEILVLGRSHSHYPTLVKELYEEGKDSYEFQVDSSGVSGVAIKLQSFDRSGVLRLPVKQLEGYRHYPDISNRDFLMVEFKQLPKSHAKSMILSGLIPHLRRLTQEDKDSILYGGTNFYGRNRFSPEENADFKQYIGPHGKSQYLPRQGGYKAFIQIHSDEAKGHRHGIYHGGSHTETEFRRGGGYHQHGNRGGRGGYQGNQGYQANSGGYQNSYQGSYQGGYRGGYQGGSQGRYQAGYQSGYQGGYQGEYKNGYQGGYQGNQGNQGYNRQTYNASKSGTLPMKRRHNSGPSSGLEVLFQ |
| Decapping nuclease | B | 384 | Komagataella Phaffii | GPGMSKEKILPLAARSKKAMLRQPKQVAYFSRDLNYKTHPDRSNLSYYYLPDGDIDNSIDLSVGSKHFLLGDSVELSKLDPILLALKEIEKESGAKTKDRIITWRGIMRKLLTLPYDSEEDFVLDVVSFDGQLFIQFNVPYLKSKDVQKQGDTEFHKKLQFSGYKFEKMATLPKPWPECTRKEIDSRAKSKCNNIEQYGAIVRTGISRIKILIGGAVACTADYYDENDPLSRYIELKTTRTINQYKDMIAFEKKLFRTWAQCFLLGIPKIIYGFRDDNCILRTVEEFSTNDIPLMVKNNPLNEQPKKENCYMSSINFYGAVVEWLNESVKDDQVWKLSYAKRNRQYLVLKEVTDENEKQQIVDSAIPAWFKEWRSELRNSEGNI |
| Decapping nuclease | D | 384 | Komagataella Phaffii | GPGMSKEKILPLAARSKKAMLRQPKQVAYFSRDLNYKTHPDRSNLSYYYLPDGDIDNSIDLSVGSKHFLLGDSVELSKLDPILLALKEIEKESGAKTKDRIITWRGIMRKLLTLPYDSEEDFVLDVVSFDGQLFIQFNVPYLKSKDVQKQGDTEFHKKLQFSGYKFEKMATLPKPWPECTRKEIDSRAKSKCNNIEQYGAIVRTGISRIKILIGGAVACTADYYDENDPLSRYIELKTTRTINQYKDMIAFEKKLFRTWAQCFLLGIPKIIYGFRDDNCILRTVEEFSTNDIPLMVKNNPLNEQPKKENCYMSSINFYGAVVEWLNESVKDDQVWKLSYAKRNRQYLVLKEVTDENEKQQIVDSAIPAWFKEWRSELRNSEGNI |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-02-24 Deposition Author(s): Ehara, H. , Murayama, Y. , Sekine, S.I. , Yanagisawa, T.