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8YE4

The complex of tcr nyn-i and hla-a24 bound to sars-cov-2 spike448-456 peptide nynylyrlf

PDB DOI: 10.2210/pdb8ye4/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-02-21
Deposition Author(s): Deng, S.S. , Jin, T.C. , Wang, M.H. , Xu, Z.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.2 Å

Literature

The complex of tcr nyn-i and hla-a24 bound to sars-cov-2 spike448-456 peptide nynylyrlf

Deng, S.S. , Jin, T.C. , Wang, M.H. , Xu, Z.H.

Primary Citation of Related Structures: 8YE4


Proteins
Molecule Chains Sequence Length Organism Sequence
MHC class I antigen precusor A 274 Homo Sapiens , Synthetic Construct GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
MHC class I antigen precusor C 274 Homo Sapiens , Synthetic Construct GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
Beta-2-microglobulin B 99 Homo Sapiens , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin D 99 Homo Sapiens , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Spike protein S1 E 9 Homo Sapiens , Synthetic Construct NYNYLYRLF
Spike protein S1 F 9 Homo Sapiens , Synthetic Construct NYNYLYRLF
TCR NYN-I alpha chain G 187 Homo Sapiens , Synthetic Construct EVEQDPGPFNVPEGATVAFNCTYSNSASQSFFWYRQDCRKEPKLLMSVYSSGNEDGRFTAQLNRASQYISLLIRDSKLSDSATYLCVVNAHSGAGSYQLTFGKGTKLSVIPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAF
TCR NYN-I alpha chain I 187 Homo Sapiens , Synthetic Construct EVEQDPGPFNVPEGATVAFNCTYSNSASQSFFWYRQDCRKEPKLLMSVYSSGNEDGRFTAQLNRASQYISLLIRDSKLSDSATYLCVVNAHSGAGSYQLTFGKGTKLSVIPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAF
TCR NYN-I beta chain H 238 Homo Sapiens , Synthetic Construct AGVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPNGYNVSRLNKREFSLRLESAAPSQTSVYFCASSETGGYEQYFGPGTRLTVTDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR
TCR NYN-I beta chain J 238 Homo Sapiens , Synthetic Construct AGVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPNGYNVSRLNKREFSLRLESAAPSQTSVYFCASSETGGYEQYFGPGTRLTVTDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-02-21
Deposition Author(s): Deng, S.S. , Jin, T.C. , Wang, M.H. , Xu, Z.H.