PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YBL

Crystal structure of nanobody seb-nb3 bound to staphylococcal enterotoxin b (seb)

PDB DOI: 10.2210/pdb8ybl/pdb

Classification: ANTITOXIN
Organism(s): Staphylococcus Aureus , Vicugna Pacos

Deposited: 2024-02-15
Deposition Author(s): Ding, Y. , Liu, P. , Liu, R. , Zong, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.33 Å

8ybl
Literature

Crystal structure of nanobody seb-nb3 bound to staphylococcal enterotoxin b (seb)

Ding, Y. , Liu, P. , Liu, R. , Zong, X.

Primary Citation of Related Structures: 8YBL


Proteins
Molecule Chains Sequence Length Organism Sequence
Enterotoxin type B A 240 Staphylococcus Aureus , Vicugna Pacos MESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKKK
nanobody SEB-Nb3 B 128 Staphylococcus Aureus , Vicugna Pacos QVQLVESGGGSVQAGGSLRLSCAASGYTYSMYCMGWFRQAPGKEREGVAGICANGKAIHYVDSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAADSRGGIWYEQQLSTLRYNYWGQGTQVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-02-15
Deposition Author(s): Ding, Y. , Liu, P. , Liu, R. , Zong, X.