8YA0
Structure of the seca-secy complex with the substrate ftsq-lacy(+7c)
PDB DOI: 10.2210/pdb8ya0/pdb
Classification: PROTEIN TRANSPORT Organism(s): Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama
Deposited: 2024-02-07 Deposition Author(s): Gao, N. , Li, L. , Ma, C. , Ou, X. , Sun, D. , Wu, X. , Xu, J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.97 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Protein translocase subunit SecA | A | 765 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | RTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKERLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKA |
| Protein translocase subunit SecY | Y | 429 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | FRTISNFMRVSDIRNKIIFTLLMLIVFRIGTFIPVPSVNTDVLKLQDQLNAFGVLNIFCGGALQNFSIFAMGVMPYITASIIVQLLQMDVVPKFAEWSKQGEMGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLAGGMLIQNPGIGTYLLIAVVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIVSGIPTILNQIYAQTFENVGEDLTLNIVRLLLVALAVVAVIVGVIYIQQAFRKIPIQYAKRLEGRNPVGGHSTHLPLKVNPAGVIPVIFAVSFLIAPPTIASFFGTNDVTLWIRRTFDYTHPVGMTIYVVLIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGIRPGKNTQEYVTRILYRLTLVGSLFLAFIAVLPVFFVNFANLPPSAQIGGTSLLIVVGVALETMKQLESQLVKRHYRGFIK |
| Protein translocase subunit SecE | E | 58 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | QRVTNFFKEVVRELKKVSWPNRKELVNYTAVVLATVAFFTVFFAVIDLGISQLIRLVF |
| Nanobody | V | 116 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | QVQLVETGGGLVQPGGSLRLSCGASGSIFNMYAMGWYRQAPGKRREVVARIATDDSTMYPDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYYQRTVMSQPYWGQGTQVTVS |
| Cell division protein FtsQ,Lactose permease | B | 72 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | AKKTILFLLTVLTTVLVSGWVVLGAQYEDGCSGVVILKTLHMFEVPFLLVGAFSNADTSISGDGDSPHSYHS |
| Nanobody | C | 113 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | VALVESGGALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVYLQMNSLKPEDTAVYYCNVNVGFEYWGQGTQVTVS |
| Green fluorescent protein | G | 227 | Aequorea Victoria , Bacillus Subtilis Subsp. Subtilis Str. 168 , Escherichia Coli K-12 , Geobacillus Thermodenitrificans Ng80-2 , Lama Glama | KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGI |
Experimental Data
Method: ELECTRON MICROSCOPY