PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8Y9Z

Structure of the seca-secy complex with the substrate hmbri-3tm

PDB DOI: 10.2210/pdb8y9z/pdb

Classification: PROTEIN TRANSPORT
Organism(s): Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama

Deposited: 2024-02-07
Deposition Author(s): Gao, N. , Li, L. , Ma, C. , Ou, X. , Sun, D. , Wu, X. , Xu, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.41 Å

8y9z
Literature

Structure of the seca-secy complex with the substrate hmbri-3tm

Gao, N. , Li, L. , Ma, C. , Ou, X. , Sun, D. , Wu, X. , Xu, J.

Primary Citation of Related Structures: 8Y9Z


Proteins
Molecule Chains Sequence Length Organism Sequence
Protein translocase subunit SecA A 778 Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama MLGILNKMFDPTKRTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKERLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKA
Protein translocase subunit SecY Y 430 Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama MFRTISNFMRVSDIRNKIIFTLLMLIVFRIGTFIPVPSVNTDVLKLQDQLNAFGVLNIFCGGALQNFSIFAMGVMPYITASIIVQLLQMDVVPKFAEWSKQGEMGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLAGGMLIQNPGIGTYLLIAVVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIVSGIPTILNQIYAQTFENVGEDLTLNIVRLLLVALAVVAVIVGVIYIQQAFRKIPIQYAKRLEGRNPVGGHSTHLPLKVNPAGVIPVIFAVSFLIAPPTIASFFGTNDVTLWIRRTFDYTHPVGMTIYVVLIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGIRPGKNTQEYVTRILYRLTLVGSLFLAFIAVLPVFFVNFANLPPSAQIGGTSLLIVVGVALETMKQLESQLVKRHYRGFIK
Protein translocase subunit SecE E 70 Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama MQRVTNFFKEVVRELKKVSWPNRKELVNYTAVVLATVAFFTVFFAVIDLGISQLIRLVFEGGHHHHHHHH
Nanobody V 117 Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama QVQLVETGGGLVQPGGSLRLSCGASGSIFNMYAMGWYRQAPGKRREVVARIATDDSTMYPDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYYQRTVMSQPYWGQGTQVTVSS
Bacteriorhodopsin-I B 99 Bacillus Subtilis Subsp. Subtilis Str. 168 , Geobacillus Thermodenitrificans Ng80-2 , Haloarcula Marismortui Atcc 43049 , Lama Glama MPAPGSEGIWLWLGTAGMFLGMLYFIARGWGETDGRRQKFYIATILITAIAFVNYLAMALGFGLTFIEFGGEQHCIYWARYTDWLFTTPLLLYDLGLLA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-07
Deposition Author(s): Gao, N. , Li, L. , Ma, C. , Ou, X. , Sun, D. , Wu, X. , Xu, J.