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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8Y7S

Crystal structure of a benzaldehyde lyase mutant m6 from herbiconiux sp. salv-r1

PDB DOI: 10.2210/pdb8y7s/pdb

Classification: LYASE
Organism(s): Herbiconiux Sp. Salv-R1

Deposited: 2024-02-05
Deposition Author(s): Chen, Y.Y. , Li, Y. , Liu, W.D. , Wu, Q.Q. , Yao, P.Y. , Zhang, Y.F. , Zhu, D.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.68 Å

8y7s
Literature

Crystal structure of a benzaldehyde lyase mutant m6 from herbiconiux sp. salv-r1

Chen, Y.Y. , Li, Y. , Liu, W.D. , Wu, Q.Q. , Yao, P.Y. , Zhang, Y.F. , Zhu, D.M.

Primary Citation of Related Structures: 8Y7S


Proteins
Molecule Chains Sequence Length Organism Sequence
Thiamine pyrophosphate-binding protein A 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein B 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein C 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein D 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein E 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein F 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein G 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein H 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein I 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein J 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein K 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Thiamine pyrophosphate-binding protein L 558 Herbiconiux Sp. Salv-R1 MTATGGELVIRTLERASVDVAFGINGIHIDSIYQAALDRSFRIVDTRNEMNAGHAAEGYARAGHRLGVALLTAGGGFTNAVTSIANAHLDRTPVLYIAASGPLGVDETNTLQAGIDQVAIATPITKWAHRVTRVELLPRLIAQAIRIATHGPRGPVLLDIPWDVLTATVDDALADGVEELGAHALTAALGADAVERILDGLAGAERPVFIAGSELTRGDGGAALRRLAEITGTPLFSDTEALGAIRESPLSFGLLQGLFGLDEAERPDRVVLFGLRFGLATAHGSGILIPRDAAVVQIDSDARELGRLQPIELGAVGDPAAAAEELARAALTWAAGWPDRSRWQERLRELVDGRFESVTAQAVRDDRIHPMDAVTAIAETVPAGSVVVADGALTYLWLSETISRAPVADYLCHGYLSSMGVGVGTALGAQAADVTRPVVLVTGDGAVGYSLGEFDSMVRAGLPVVVVVLNNRAWGATLHAQELILGPDRVVNNRLENGSYSGVARALGADSIDVSDIADLAPTLREALASGRPTCIEVHVSLAPVPPELNVLLGGKPF
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-02-05
Deposition Author(s): Chen, Y.Y. , Li, Y. , Liu, W.D. , Wu, Q.Q. , Yao, P.Y. , Zhang, Y.F. , Zhu, D.M.