8Y2I
Ternary structure of dlescas12e-sgrna-dsdna
PDB DOI: 10.2210/pdb8y2i/pdb
Classification: DNA BINDING PROTEIN/DNA/RNA Organism(s): Lentisphaerota , Synthetic Construct
Deposited: 2024-01-26 Deposition Author(s): Lin, S. , Liu, J.J.G. , Zhang, S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.92 Å
Ternary structure of dlescas12e-sgrna-dsdna
Lin, S. , Liu, J.J.G. , Zhang, S.
Primary Citation of Related Structures: 8Y2I
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (35-MER) | b | 35 | NA | GGATCGTTCACCAGGGTGTCGCCCTCAAAATCCCG |
| DNA (35-MER) | d | 35 | NA | CGGGATTTTGAGGGCGACACAAGTTGTCCAGATCC |
| sgRNA | c | 135 | NA | GCCCGUUAGUAUUUUCUUUGAUUCUGUACGCCUGCCGGCCCCACCGGAUGUGACGUACUUCGCGAACAUCAACGGUUCUUCGGAACCGCUGACGCUCGCGAAGAUGGAUUCAAAGAGGGCGACACCCUGGUGAAC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| dLesCas12e | A | 899 | Lentisphaerota , Synthetic Construct | MPTKNRKTDSTSIHASLRHLLQLGLKRSEAAIPQTITRTAKFKINTAIKPGLIPLLNAQFDAVEGFRRKVLGELEAWWNEDPEAFQKMVKCSMKMKFQGKSSCYAWLYTHFLKGATLAQGLSRDAANSLLDNMGGGLKSFLTRRAHVAEEIRKRYDQNLGDWDDGLKDLAAEHGLELPPPPPRVNFEKLTAQEIEKYNDWVGRTRAWGNLLLIQKKKVERRDACLPRYLKGYPGFPGSQRYATASAMAAALAELEQAAREQYGKARARFAKVSAESWAQTVERFAPAPVRAEHGRPEPRTAHQTVSARLAALIAAQPGWQPAQLAEEILAGVLRGAEKLKTHLSKCGSHDRQAVIKLANLYNVAVAFALEPVRVAGDYLSFYAEETPKRKAFGNVRGALHQPSDDTAAIQITGFSINDEGSPNYNGLLVCKQSGDRLHDEWAFLFCHQPGQVFQLAAEDAKLRGKILTEWLGFGSQGGSRKKAEASAKKMIRRPVWMNEKTPPTILPLAFGVRQGREYLWHFDRNLRTKEGWVLGNGRLLRVMPPGRPHAADFYLTLTLEREAPPLAEVAAEKYIGIARGEAVPAAYAIIDREGRLLAGGKIAEAFRDQQRKTNDEKRELQRTAGGYTKAFRSKERNRARALGGEVTRAIFALSAAHRAPVILANLNSSLATRGGKGTMMSQMQYERMLVALEQKFAEAGLYALPSAPKYRKGDNGFIKLVGPAYTSATCSACGHVHSSDFYEKLADTLEGKCGSSWCVTLPNGEQQQLPDAYTFWLKGKGEQTKSTHERLEELLKGKSVAKLAKTNRRKLVGLLKSRWLPYRATQADFSCVLCGHTMNAAEQGALNIARKFLFRTERGKQAGELTEAERRKMRADWQNWYKEKLRTVWRAPERGDGNG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-01-26 Deposition Author(s): Lin, S. , Liu, J.J.G. , Zhang, S.