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FASTA Sequence PDB Format mmCIF Format
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8Y0B

Crystal structure of fncas12a in complex with pre-crrna and 12nt target dna

PDB DOI: 10.2210/pdb8y0b/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Francisella Tularensis Subsp. Novicida U112 , Synthetic Construct

Deposited: 2024-01-22
Deposition Author(s): Chen, J. , Lin, X. , Liu, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

8y0b
Literature

Crystal structure of fncas12a in complex with pre-crrna and 12nt target dna

Chen, J. , Lin, X. , Liu, L.

Primary Citation of Related Structures: 8Y0B


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (53-MER) b 58 NA GGAAUUUCUACUGUUGUAGAUGAGAAGUCAUUUAAUAAGGCCGUCUAAGAACUUUAUC
DNA (5'-D(P*AP*AP*AP*TP*GP*AP*CP*TP*TP*CP*TP*CP*TP*AP*AP*AP*GP*GP*AP*CP*T)-3') c 21 NA AAATGACTTCTCTAAAGGACT
DNA (5'-D(P*AP*GP*TP*CP*CP*TP*TP*TP*AP*GP*AP*TP*A)-3') d 18 NA AGTCCTTTAGATAAAGTT

Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas12a A 1300 Francisella Tularensis Subsp. Novicida U112 , Synthetic Construct MSIYQEFVNKYSLSKTLRFELIPQGKTLENIKARGLILDDEKRAKDYKKAKQIIDKYHQFFIEEILSSVCISEDLLQNYSDVYFKLKKSDDDNLQKDFKSAKDTIKKQISEYIKDSEKFKNLFNQNLIDAKKGQESDLILWLKQSKDNGIELFKANSDITDIDEALEIIKSFKGWTTYFKGFHENRKNVYSSNDIPTSIIYRIVDDNLPKFLENKAKYESLKDKAPEAINYEQIKKDLAEELTFDIDYKTSEVNQRVFSLDEVFEIANFNNYLNQSGITKFNTIIGGKFVNGENTKRKGINEYINLYSQQINDKTLKKYKMSVLFKQILSDTESKSFVIDKLEDDSDVVTTMQSFYEQIAAFKTVEEKSIKETLSLLFDDLKAQKLDLSKIYFKNDKSLTDLSQQVFDDYSVIGTAVLEYITQQIAPKNLDNPSKKEQELIAKKTEKAKYLSLETIKLALEEFNKHRDIDKQCRFEEILANFAAIPMIFDEIAQNKDNLAQISIKYQNQGKKDLLQASAEDDVKAIKDLLDQTNNLLHKLKIFHISQSEDKANILDKDEHFYLVFEECYFELANIVPLYNKIRNYITQKPYSDEKFKLNFENSTLANGWDKNKEPDNTAILFIKDDKYYLGVMNKKNNKIFDDKAIKENKGEGYKKIVYKLLPGANKMLPKVFFSAKSIKFYNPSEDILRIRNHSTHTKNGSPQKGYEKFEFNIEDCRKFIDFYKQSISKHPEWKDFGFRFSDTQRYNSIDEFYREVENQGYKLTFENISESYIDSVVNQGKLYLFQIYNKDFSAYSKGRPNLHTLYWKALFDERNLQDVVYKLNGEAELFYRKQSIPKKITHPAKEAIANKNKDNPKKESVFEYDLIKDKRFTEDKFFFHCPITINFKSSGANKFNDEINLLLKEKANDVHILSIDRGERHLAYYTLVDGKGNIIKQDTFNIIGNDRMKTNYHDKLAAIEKDRDSARKDWKKINNIKEMKEGYLSQVVHEIAKLVIEYNAIVVFADLNFGFKRGRFKVEKQVYQKLEKMLIEKLNYLVFKDNEFDKTGGVLRAYQLTAPFETFKKMGKQTGIIYYVPAGFTSKICPVTGFVNQLYPKYESVSKSQEFFSKFDKICYNLDKGYFEFSFDYKNFGDKAAKGKWTIASFGSRLINFRNSDKNHNWDTREVYPTKELEKLLKDYSIEYGHGECIKAAICGESDKKFFAKLTSVLNTILQMRNSKTGTELDYLISPVADVNGNFFDSRQAPKNMPQDADANGAYHIGLKGLMLLGRIKNNQEGKKLNLVIKNEEYFEFVQNRNN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-22
Deposition Author(s): Chen, J. , Lin, X. , Liu, L.