8XYC
Ternary structure of dvemcas12e-sgrna-dsdna
PDB DOI: 10.2210/pdb8xyc/pdb
Classification: DNA BINDING PROTEIN/DNA/RNA Organism(s): Verrucomicrobiota , Synthetic Construct
Deposited: 2024-01-19 Deposition Author(s): Lin, S. , Liu, J.J.G. , Zhang, S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.51 Å
Ternary structure of dvemcas12e-sgrna-dsdna
Lin, S. , Liu, J.J.G. , Zhang, S.
Primary Citation of Related Structures: 8XYC
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (35-MER) | b | 35 | NA | GGATCGTTCACCAGGGTGTCGCCCTCAAAATCCCG |
| DNA (35-MER) | d | 35 | NA | CGGGATTTTGAGGGCGACACAAGTTGTCCAGATCC |
| RNA (147-MER) | c | 147 | NA | GUUAGCUGUCUCUUCGGAGGCAGAUUUACUUUGAUUCUUUGCGCCUUUACGUCCCACGUAUUUGACGCAACUCGCGAACUUCAGCGGUUCUUCGGAAUCGCUGACGCUCGCGGGGCUGGUUUCAAAGAGGGCGACACCCUGGUGAAC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| dVemCas12e | A | 880 | Verrucomicrobiota , Synthetic Construct | MKTKNRSNSIHASLRQLLALGLSKSSSAEPQRITRTVKFKINTDIRPDLIPVLNRHFDFFEKFRRKVLAELEALWNKDQKSFQAMVQCSAKKPYQKKTSCYAWLDTHFITEAKESLDLPRKPATSLLYNLSGGLKSFLTRRETVAEDIQKRFNDNLREWNGDLSQLASDLKAPLPPAPPNLDFENLIEKAIEKYNDWVGRTRAWCNLILVQQKKVERRDACLPRYLKGYPGFFGSQRYATTAGLAENLKKLEQVAREQSKKMPTRFAKLTPEIWTAIQERFSPPEVCEAGEKRRPRTAHQTVCLRFAALRAAHPEWTPVQLAEEILAGIFRGAEKLKKHLAANGFTDRPAVIKLANLYNVAAAFSLDPIRAAGDYILFYEEETPKRNAFGDVRGGLHQPSDESAAIEIMGFGLQKESGKPLYNGLLVCKKSEKEHDDSWAFLYCHTEGQTFELANEKAKLRGKLLTDWTGFASRGGSRKKAEASAKQLARGRVWISEKTPPTVLPLAFGSRQGREYLWHFDRDLREKNEWVLGNGRLLRIMPPGQPNAADFYLAITLERQVPPLADIKAERFIGIARGEAIPAAYAVIDELGKLLASGKIAESYRKQQREFNDAKRELQRTQGGYTRWLRSKERNRARALSGEVTRAVLALAAEHRAPVVLANLNSSLAMRGGKKTMMSLMQYQPVQRALEQKFLEAGLWEAPKRKQKFPKKDNGFIKLIDAWWTSRTCSQCGNTHSSEFYEKLGETLTHAPDEKWCVTVCERPFVLPDTYQYRFRGEDKVGNTNERLQSLLKGKQIKELTGKQREHLIEFLERLLSFRPQQANFRCLKCGYETNAAVQAALTIARKYLFELEHPPKKGEKDRRLKWQAWYQEKLRTVWK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-01-19 Deposition Author(s): Lin, S. , Liu, J.J.G. , Zhang, S.