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8XXK

Crystal structure of human 8-oxoguanine glycosylase k249h mutant bound to the reaction intermediate derived from the crystal soaked into the solution at ph 4.0 under 298 k for 3 weeks

PDB DOI: 10.2210/pdb8xxk/pdb

Classification: DNA/HYDROLASE
Organism(s): Homo Sapiens

Deposited: 2024-01-18
Deposition Author(s): Koga, M. , Komuro, S. , Minowa, N. , Tanaka, Y. , Unno, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.7 Å

Literature

Crystal structure of human 8-oxoguanine glycosylase k249h mutant bound to the reaction intermediate derived from the crystal soaked into the solution at ph 4.0 under 298 k for 3 weeks

Koga, M. , Komuro, S. , Minowa, N. , Tanaka, Y. , Unno, M.

Primary Citation of Related Structures: 8XXK


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*GP*CP*GP*TP*CP*CP*A)-3') c 8 NA AGCGTCCA
DNA (5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3') d 16 NA TGGTAGACCTGGACGC
DNA (5'-D(P*GP*TP*CP*TP*AP*CP*C)-3') g 7 NA GTCTACC

Proteins
Molecule Chains Sequence Length Organism Sequence
N-glycosylase/DNA lyase A 336 Homo Sapiens GPGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTHVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKRRKGSKGPEG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-18
Deposition Author(s): Koga, M. , Komuro, S. , Minowa, N. , Tanaka, Y. , Unno, M.