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8XUF

Cdf1 dof domain in palindromic-bound complex with dna duplex

PDB DOI: 10.2210/pdb8xuf/pdb

Classification: DNA/DNA BINDING PROTEIN
Organism(s): Murine Norovirus Gv/Cr6/2005/Usa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-01-12
Deposition Author(s): Furihata, H. , Miyakawa, T. , Tanokura, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

8xuf
Literature

Cdf1 dof domain in palindromic-bound complex with dna duplex

Furihata, H. , Miyakawa, T. , Tanokura, M.

Primary Citation of Related Structures: 8XUF


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*TP*CP*AP*TP*AP*AP*AP*GP*TP*AP*TP*AP*CP*TP*TP*TP*AP*TP*G)-3') a 20 NA TTCATAAAGTATACTTTATG
DNA (5'-D(*AP*AP*CP*AP*TP*AP*AP*AP*GP*TP*AP*TP*AP*CP*TP*TP*TP*AP*TP*G)-3') b 20 NA AACATAAAGTATACTTTATG

Proteins
Molecule Chains Sequence Length Organism Sequence
CDF1 C 65 Murine Norovirus Gv/Cr6/2005/Usa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPLGSPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNN
CDF1 D 65 Murine Norovirus Gv/Cr6/2005/Usa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPLGSPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-12
Deposition Author(s): Furihata, H. , Miyakawa, T. , Tanokura, M.