PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8XUF

Cdf1 dof domain in palindromic-bound complex with dna duplex

PDB DOI: 10.2210/pdb8xuf/pdb

Classification: DNA/DNA BINDING PROTEIN
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2024-01-12
Deposition Author(s): Furihata, H. , Miyakawa, T. , Tanokura, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

Literature

Cdf1 dof domain in palindromic-bound complex with dna duplex

Furihata, H. , Miyakawa, T. , Tanokura, M.

Primary Citation of Related Structures: 8XUF


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*TP*CP*AP*TP*AP*AP*AP*GP*TP*AP*TP*AP*CP*TP*TP*TP*AP*TP*G)-3') a 20 NA TTCATAAAGTATACTTTATG
DNA (5'-D(*AP*AP*CP*AP*TP*AP*AP*AP*GP*TP*AP*TP*AP*CP*TP*TP*TP*AP*TP*G)-3') b 20 NA AACATAAAGTATACTTTATG

Proteins
Molecule Chains Sequence Length Organism Sequence
CDF1 C 65 Arabidopsis Thaliana , Synthetic Construct GPLGSPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNN
CDF1 D 65 Arabidopsis Thaliana , Synthetic Construct GPLGSPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-12
Deposition Author(s): Furihata, H. , Miyakawa, T. , Tanokura, M.