PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8XOO

Cryo-em structure of the clpc1:clpp1p2 degradation complex in streptomyces hawaiiensis

PDB DOI: 10.2210/pdb8xoo/pdb

Classification: HYDROLASE
Organism(s): Bos Taurus , Streptomyces Hawaiiensis

Deposited: 2024-01-01
Deposition Author(s): Long, F. , Xu, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 1.84 Å

8xoo
Literature

Cryo-em structure of the clpc1:clpp1p2 degradation complex in streptomyces hawaiiensis

Long, F. , Xu, X.

Primary Citation of Related Structures: 8XOO


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent Clp protease proteolytic subunit A 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit B 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit C 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit D 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit E 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit F 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit G 226 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLASDPEKDIYLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAAAMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVMTTAAGMPGGGGTGA
ATP-dependent Clp protease proteolytic subunit H 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit I 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit J 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit K 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit L 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit M 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
ATP-dependent Clp protease proteolytic subunit N 207 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMEYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAAAAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQVISTRKMDNSSLR
NDP-hexose 4-ketoreductase R 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
NDP-hexose 4-ketoreductase Q 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
NDP-hexose 4-ketoreductase P 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
NDP-hexose 4-ketoreductase O 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
NDP-hexose 4-ketoreductase T 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
NDP-hexose 4-ketoreductase S 696 Bos Taurus , Streptomyces Hawaiiensis MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDALHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDAEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDAVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLSQADILKIVDLMIDKVDERLKDRDMGIELSSSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEE
casein X 24 Bos Taurus , Streptomyces Hawaiiensis XXXXXXXXXXXXXXXXXXXXXXXX
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-01
Deposition Author(s): Long, F. , Xu, X.