8XML
Cryo-em structure of the apo ccr8-gi complex
PDB DOI: 10.2210/pdb8xml/pdb
Classification: STRUCTURAL PROTEIN Organism(s): Adineta Vaga , Salmonella Enterica
Deposited: 2023-12-27 Deposition Author(s): Cheng, X.Y. , Jiang, H.H. , Li, J. , Peng, Q. , Zhang, J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.58 Å
Cryo-em structure of the apo ccr8-gi complex
Cheng, X.Y. , Jiang, H.H. , Li, J. , Peng, Q. , Zhang, J.
Primary Citation of Related Structures: 8XML
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Soluble cytochrome b562,C-C chemokine receptor type 8 | R | 461 | Adineta Vaga , Salmonella Enterica | ADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLMDYTLDLSVTTVTDYYYPDIFSSPCDAELIQTNGKLLLAVFYCLLFVFSLLGNSLVILVLVVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVVSGFYYIGFYSSMWFITLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLTAIMATIPLLVFYQVASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRCQNHNKTKAIRLVLIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQQLTYATHVTEIISFTHCCVNPVIYAFVGEKFKKHLSEIFQKSCSQIFNYLGRQMPRESCEKSSSCQQHSSRSSSVDYIL |
| Guanine nucleotide-binding protein G(i) subunit alpha-1 | A | 354 | Adineta Vaga , Salmonella Enterica | MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKCTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVTAQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCSTDTKNVQFVFDAVTDVIIKNNLKDCGLF |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 340 | Adineta Vaga , Salmonella Enterica | MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 71 | Adineta Vaga , Salmonella Enterica | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL |
| scFv16 | S | 267 | Adineta Vaga , Salmonella Enterica | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-12-27 Deposition Author(s): Cheng, X.Y. , Jiang, H.H. , Li, J. , Peng, Q. , Zhang, J.