PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8XK7

Binary complex of dna polymerase sfm4-3 recognizing c2 methyoxy nucleotide

PDB DOI: 10.2210/pdb8xk7/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Thermus Aquaticus , Synthetic Construct

Deposited: 2023-12-22
Deposition Author(s): Gong, W. , Liu, H. , Wen, C. , Yang, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

8xk7
Literature

Binary complex of dna polymerase sfm4-3 recognizing c2 methyoxy nucleotide

Gong, W. , Liu, H. , Wen, C. , Yang, L.

Primary Citation of Related Structures: 8XK7


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I, thermostable A 554 Thermus Aquaticus , Synthetic Construct MEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAALEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQSIPVRTPLGQRIRRAFIAEEGWLLVALDYSQEGLRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVNPLMRRAAKTINFGVLYGMSAHRLSQKLAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRQAAERRAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKEAAKLAAALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA(5'-D(*AP*AP*AP*CP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP*OMG)-3') b 17 NA AAACGGCGCCGTGGTCG
DNA(5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*CP*OMG)-3') c 13 NA GACCACGGCGCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-12-22
Deposition Author(s): Gong, W. , Liu, H. , Wen, C. , Yang, L.