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8XK7

Binary complex of dna polymerase sfm4-3 recognizing c2 methyoxy nucleotide

PDB DOI: 10.2210/pdb8xk7/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Thermus Aquaticus , Synthetic Construct

Deposited: 2023-12-22
Deposition Author(s): Gong, W. , Liu, H. , Wen, C. , Yang, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

Binary complex of dna polymerase sfm4-3 recognizing c2 methyoxy nucleotide

Gong, W. , Liu, H. , Wen, C. , Yang, L.

Primary Citation of Related Structures: 8XK7


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I, thermostable A 554 Thermus Aquaticus , Synthetic Construct MEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAALEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQSIPVRTPLGQRIRRAFIAEEGWLLVALDYSQEGLRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVNPLMRRAAKTINFGVLYGMSAHRLSQKLAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRQAAERRAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKEAAKLAAALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA(5'-D(*AP*AP*AP*CP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP*OMG)-3') b 17 NA AAACGGCGCCGTGGTCG
DNA(5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*CP*OMG)-3') c 13 NA GACCACGGCGCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-12-22
Deposition Author(s): Gong, W. , Liu, H. , Wen, C. , Yang, L.