PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8XK0

Structure of the argonaute protein from kurthia massiliensis in complex with guide dna and 19-mer target dna in pre-cleavage state

PDB DOI: 10.2210/pdb8xk0/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Kurthia Massiliensis , Synthetic Construct

Deposited: 2023-12-22
Deposition Author(s): Ding, H. , Tao, X. , Wu, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.96 Å

8xk0
Literature

Structure of the argonaute protein from kurthia massiliensis in complex with guide dna and 19-mer target dna in pre-cleavage state

Ding, H. , Tao, X. , Wu, S.

Primary Citation of Related Structures: 8XK0


Proteins
Molecule Chains Sequence Length Organism Sequence
KmAgo A 737 Kurthia Massiliensis , Synthetic Construct MEAYITEMVSRERANELEVYVYVFPRKQSDNNYEGVYHIMRAWQRANDLPLAYNQHTIMAFSPVRHMCGYTPMETQKRHINIDSPFERALLERLIKNSLIFTAERHLHAKRVGHALRLNQVQQIRQVIIYEAIELYVNIIENRISIGFHLTHQFEYVYTLQSMIEQGKTIRPGMRVVHSNGRQHYTYTVENVATYGVTDRCPLLQTSIYQYYVEKGAQHILRTFTRSTRVIHVRTKEQRLSYAATLLKPLCTFETMQPQDVLNVSKCIKLSASKRMKCTYRWIQQLRAQYRHLTFAPNPFTIAQNGYKLDQLSTPKVHFHRDYATVVSGMKTGKLYKGGNIKISVLFDEDFYLKHHITKKDIYQFIAVLQKIAIAQGVNMTISTSTKSITGKFTDDFFHHFTEEVEALQPIFAQTTVLAFITSTHLSNKKTRSYQLLKQYFGGKWDIASQVITEKTIEAFQKILHKHGLKNFYPNDEQHCLRVIDVLKNESFYYTVMNILLGVYVKSGIQPWILANTTHSDCFIGIDVSHENGNSAAGMMNVIGSQGHLIQQAPLNGILAGEKIDDTLLANLLKQMIKAYHTQFQRFPKHITIHRDGFWREHTALVEKIMSHYEITYDIVEIIKKPNRRMAFFNSVDNTFSTRQGTVYQRGNEAFLCATNPQQKVGMAQPIKIHQVTKTLPFSHIIEDVYNLSFLHIHAMNKMRLPATIHYADLSATAYQRGQVMPRSGNQTNLPFV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
guide DNA b 18 NA TGAGGTAGTAGGTTGTAT
target DNA c 19 NA TATACAACCTACTACCTCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-22
Deposition Author(s): Ding, H. , Tao, X. , Wu, S.