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8XJX

Structure of the argonaute protein from kurthia massiliensis in complex with guide dna and 19-mer target dna

PDB DOI: 10.2210/pdb8xjx/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Cellvibrio Japonicus Ueda107 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2023-12-22
Deposition Author(s): Ding, H. , Tao, X. , Wu, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.78 Å

8xjx
Literature

Structure of the argonaute protein from kurthia massiliensis in complex with guide dna and 19-mer target dna

Ding, H. , Tao, X. , Wu, S.

Primary Citation of Related Structures: 8XJX


Proteins
Molecule Chains Sequence Length Organism Sequence
KmAgo A 737 Cellvibrio Japonicus Ueda107 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEAYITEMVSRERANELEVYVYVFPRKQSDNNYEGVYHIMRAWQRANDLPLAYNQHTIMAFSPVRHMCGYTPMETQKRHINIDSPFERALLERLIKNSLIFTAERHLHAKRVGHALRLNQVQQIRQVIIYEAIELYVNIIENRISIGFHLTHQFEYVYTLQSMIEQGKTIRPGMRVVHSNGRQHYTYTVENVATYGVTDRCPLLQTSIYQYYVEKGAQHILRTFTRSTRVIHVRTKEQRLSYAATLLKPLCTFETMQPQDVLNVSKCIKLSASKRMKCTYRWIQQLRAQYRHLTFAPNPFTIAQNGYKLDQLSTPKVHFHRDYATVVSGMKTGKLYKGGNIKISVLFDEDFYLKHHITKKDIYQFIAVLQKIAIAQGVNMTISTSTKSITGKFTDDFFHHFTEEVEALQPIFAQTTVLAFITSTHLSNKKTRSYQLLKQYFGGKWDIASQVITEKTIEAFQKILHKHGLKNFYPNDEQHCLRVIDVLKNESFYYTVMNILLGVYVKSGIQPWILANTTHSDCFIGIDVSHENGNSAAGMMNVIGSQGHLIQQAPLNGILAGEKIDDTLLANLLKQMIKAYHTQFQRFPKHITIHRDGFWREHTALVEKIMSHYEITYDIVEIIKKPNRRMAFFNSVDNTFSTRQGTVYQRGNEAFLCATNPQQKVGMAQPIKIHQVTKTLPFSHIIEDVYNLSFLHIHAMNKMRLPATIHYADLSATAYQRGQVMPRSGNQTNLPFV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
guide DNA b 18 NA TGAGGTAGTAGGTTGTAT
target DNA c 19 NA TATACAACCTACTACCTCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-22
Deposition Author(s): Ding, H. , Tao, X. , Wu, S.